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    RTN4 reticulon 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 619181, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RTN4provided by VGNC
    Official Full Name
    reticulon 4provided by VGNC
    Primary source
    VGNC:VGNC:106215
    See related
    Ensembl:ENSMMUG00000021299
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RTN4-Cw
    Orthologs
    human mouse all
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    Genomic context

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    See RTN4 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (53618879..53699417)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (55925824..56006879, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671707 Neighboring gene uncharacterized LOC114671708 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene EMAP like 6 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC114671805

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the reticulon gene family demonstrates the absence of the neurite growth inhibitor Nogo-A in fish. Diekmann H, et al. Mol Biol Evol, 2005 Aug. PMID 15858203
    2. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum tubular network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    reticulon-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205127.2 → NP_001192056.2  reticulon-4

      Status: VALIDATED

      Source sequence(s)
      QNVO02000094
      UniProtKB/TrEMBL
      A0A5F8A8J0, F6UZQ6
      Related
      ENSMMUP00000028056.3, ENSMMUT00000029977.4
      Conserved Domains (1) summary
      pfam02453
      Location:1006 → 1170
      Reticulon

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      53618879..53699417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112349.2 → XP_014967835.2  reticulon-4 isoform X2

      UniProtKB/TrEMBL
      F6ZYE6, I2CTJ8
      Related
      ENSMMUP00000036547.3, ENSMMUT00000043544.3
      Conserved Domains (1) summary
      pfam02453
      Location:186 → 350
      Reticulon

    2. XM_015112348.2 → XP_014967834.1  reticulon-4 isoform X1

      UniProtKB/TrEMBL
      G7NA29
      Conserved Domains (1) summary
      pfam02453
      Location:799 → 963
      Reticulon; Reticulon

    3. XM_015112350.2 → XP_014967836.1  reticulon-4 isoform X3

      UniProtKB/TrEMBL
      F6ZYD1, H9YXD4, Q4FZ92
      Related
      ENSMMUP00000036549.3, ENSMMUT00000043546.3
      Conserved Domains (1) summary
      pfam02453
      Location:12 → 176
      Reticulon; Reticulon
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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