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    ZFHX4 zinc finger homeobox 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701524, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZFHX4provided by VGNC
    Official Full Name
    zinc finger homeobox 4provided by VGNC
    Primary source
    VGNC:VGNC:79902
    See related
    Ensembl:ENSMMUG00000019414
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZFHX4 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (77166914..77355352)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (74913040..75101621)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680278 Neighboring gene 39S ribosomal protein L9, mitochondrial pseudogene Neighboring gene uncharacterized LOC106999820 Neighboring gene uncharacterized LOC106999821 Neighboring gene peroxisomal biogenesis factor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger homeobox protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      77166914..77355352
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145599.2 → XP_015001085.1  zinc finger homeobox protein 4 isoform X1

      UniProtKB/TrEMBL
      F6RGC8, G7MZL2
      Related
      ENSMMUP00000025515.3, ENSMMUT00000027274.4
      Conserved Domains (7) summary
      smart00389
      Location:2129 → 2184
      HOX; Homeodomain
      COG3147
      Location:2318 → 2443
      DedD; Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]
      COG5576
      Location:2541 → 2663
      COG5576; Homeodomain-containing transcription factor [Transcription]
      sd00017
      Location:1543 → 1567
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:1399 → 1419
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00046
      Location:2228 → 2282
      Homeobox; Homeobox domain
      NF033838
      Location:2392 → 2473
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

    2. XM_015145600.2 → XP_015001086.1  zinc finger homeobox protein 4 isoform X2

      UniProtKB/TrEMBL
      G7MZL2
      Conserved Domains (7) summary
      smart00389
      Location:2103 → 2158
      HOX; Homeodomain
      COG3147
      Location:2292 → 2417
      DedD; Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]
      COG5576
      Location:2515 → 2637
      COG5576; Homeodomain-containing transcription factor [Transcription]
      sd00017
      Location:1517 → 1541
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:1373 → 1393
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00046
      Location:2202 → 2256
      Homeobox; Homeobox domain
      NF033838
      Location:2366 → 2447
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
    Nucleotide Protein
    Heading Accession and Version

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