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    SKI SKI proto-oncogene [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697890, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SKIprovided by VGNC
    Official Full Name
    SKI proto-oncogeneprovided by VGNC
    Primary source
    VGNC:VGNC:77374
    See related
    Ensembl:ENSMMUG00000010280
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SKI in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (222098534..222182492, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (1281580..1364298)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 10 Neighboring gene retention in endoplasmic reticulum sorting receptor 1 Neighboring gene MORN repeat containing 1 Neighboring gene uncharacterized LOC114674399 Neighboring gene uncharacterized LOC100430539 Neighboring gene uncharacterized LOC697268 Neighboring gene FA core complex associated protein 20 Neighboring gene protein kinase C zeta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ski oncogene
    Names
    v-ski sarcoma viral oncogene homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      222098534..222182492 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135489.2 → XP_014990975.2  ski oncogene isoform X2

      Conserved Domains (4) summary
      PTZ00449
      Location:318 → 478
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart01046
      Location:217 → 312
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
      COG1196
      Location:538 → 709
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02437
      Location:92 → 190
      Ski_Sno; SKI/SNO/DAC family

    2. XM_028841065.1 → XP_028696898.1  ski oncogene isoform X1

      UniProtKB/TrEMBL
      F6PUV5
      Related
      ENSMMUP00000013457.4, ENSMMUT00000014367.4
      Conserved Domains (4) summary
      PTZ00449
      Location:318 → 478
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      smart01046
      Location:217 → 312
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
      COG1196
      Location:540 → 711
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02437
      Location:92 → 190
      Ski_Sno; SKI/SNO/DAC family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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