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    EFL1 elongation factor like GTPase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713570, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EFL1provided by VGNC
    Official Full Name
    elongation factor like GTPase 1provided by VGNC
    Primary source
    VGNC:VGNC:72112
    See related
    Ensembl:ENSMMUG00000023353
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See EFL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (59462611..59593303, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (59786167..59916854, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene mex-3 RNA binding family member B Neighboring gene B-cell CLL/lymphoma 7 protein family member C pseudogene Neighboring gene stabilizer of axonemal microtubules 2 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 7-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytosolic ribosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor-like GTPase 1
    Names
    elongation factor Tu GTP-binding domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      59462611..59593303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851229.1 → XP_028707062.1  elongation factor-like GTPase 1 isoform X2

      UniProtKB/TrEMBL
      F7ECG1
      Conserved Domains (1) summary
      cl30786
      Location:1 → 1057
      FusA; Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]

    2. XM_015142866.2 → XP_014998352.1  elongation factor-like GTPase 1 isoform X1

      UniProtKB/TrEMBL
      F7ECG1, H9ZDJ7
      Related
      ENSMMUP00000030739.4, ENSMMUT00000032853.4
      Conserved Domains (6) summary
      cd01885
      Location:20 → 253
      EF2; Elongation Factor 2 (EF2) in archaea and eukarya
      cd01681
      Location:687 → 986
      aeEF2_snRNP_like_IV; This family represents domain IV of archaeal and eukaryotic elongation factor 2 (aeEF-2) and of an evolutionarily conserved U5 snRNP-specific protein. U5 snRNP is a GTP-binding factor closely related to the ribosomal translocase EF-2. In complex with GTP, ...
      cd04096
      Location:983 → 1061
      eEF2_snRNP_like_C; eEF2_snRNP_like_C: this family represents a C-terminal domain of eukaryotic elongation factor 2 (eEF-2) and a homologous domain of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart ...
      PTZ00416
      Location:1 → 1103
      PTZ00416; elongation factor 2; Provisional
      cd16268
      Location:500 → 600
      EF2_II; Domain II of Elongation Factor 2
      cd16261
      Location:616 → 687
      EF2_snRNP_III; Domain III of Elongation Factor 2 (EF2)

    RNA

    1. XR_001446032.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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