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    KCNJ13 potassium inwardly rectifying channel subfamily J member 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713741, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNJ13provided by VGNC
    Official Full Name
    potassium inwardly rectifying channel subfamily J member 13provided by VGNC
    Primary source
    VGNC:VGNC:104540
    See related
    Ensembl:ENSMMUG00000058645
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    Kir7.1
    Orthologs
    human mouse all
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    Genomic context

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    See KCNJ13 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (120198290..120208635, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (115287370..115297712, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene EF-hand domain family member D1 Neighboring gene small nucleolar RNA U13 Neighboring gene GRB10 interacting GYF protein 2 Neighboring gene elongation factor 1-beta pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene secondary ossification center associated regulator of chondrocyte maturation

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Snowflake vitreoretinal degeneration (SVD) mutation R162W provides new insights into Kir7.1 ion channel structure and function. Pattnaik BR, et al. PLoS One, 2013. PMID 23977131, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Kir7.1, R162W mutant showed a reduction of IKir7.1 and positive shift in '0' current potential.
      Title: Snowflake vitreoretinal degeneration (SVD) mutation R162W provides new insights into Kir7.1 ion channel structure and function.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inward rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inward rectifier potassium channel 13
    Names
    potassium voltage-gated channel subfamily J member 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      120198290..120208635 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831237.1 → XP_028687070.1  inward rectifier potassium channel 13 isoform X2

      Conserved Domains (1) summary
      cl21560
      Location:21 → 75
      Ion_trans_2; Ion channel

    2. XM_001114542.4 → XP_001114542.1  inward rectifier potassium channel 13 isoform X1

      See identical proteins and their annotated locations for XP_001114542.1

      UniProtKB/TrEMBL
      A0A5F7ZVU0
      Related
      ENSMMUP00000068742.1, ENSMMUT00000087840.1
      Conserved Domains (2) summary
      pfam17655
      Location:170 → 331
      IRK_C; Inward rectifier potassium channel C-terminal domain
      cl21560
      Location:21 → 163
      Ion_trans_2; Ion channel
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials