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    ISM1 isthmin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695245, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ISM1provided by VGNC
    Official Full Name
    isthmin 1provided by VGNC
    Primary source
    VGNC:VGNC:73607
    See related
    Ensembl:ENSMMUG00000015939
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ISM1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (53254007..53331871, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (46250944..46329118)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 5 Neighboring gene ESF1 nucleolar pre-rRNA processing protein homolog Neighboring gene taspase 1 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene uncharacterized LOC107000452 Neighboring gene serine palmitoyltransferase long chain base subunit 3 Neighboring gene uncharacterized LOC107000475

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    isthmin-1
    Names
    isthmin 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      53254007..53331871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828179.1 → XP_028684012.1  isthmin-1 isoform X1

      UniProtKB/TrEMBL
      F7AJE9, G7N2Z6
      Related
      ENSMMUP00000020972.4, ENSMMUT00000022416.4
      Conserved Domains (2) summary
      smart00723
      Location:289 → 452
      AMOP; Adhesion-associated domain present in MUC4 and other proteins
      smart00209
      Location:221 → 262
      TSP1; Thrombospondin type 1 repeats

    2. XM_015149488.2 → XP_015004974.1  isthmin-1 isoform X2

      UniProtKB/TrEMBL
      G7N2Z6
      Conserved Domains (2) summary
      smart00723
      Location:200 → 363
      AMOP; Adhesion-associated domain present in MUC4 and other proteins
      smart00209
      Location:132 → 173
      TSP1; Thrombospondin type 1 repeats

    3. XM_015149489.2 → XP_015004975.1  isthmin-1 isoform X2

      UniProtKB/TrEMBL
      G7N2Z6
      Conserved Domains (2) summary
      smart00723
      Location:200 → 363
      AMOP; Adhesion-associated domain present in MUC4 and other proteins
      smart00209
      Location:132 → 173
      TSP1; Thrombospondin type 1 repeats
    Nucleotide Protein
    Heading Accession and Version

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