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    VSNL1 visinin like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699459, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VSNL1provided by VGNC
    Official Full Name
    visinin like 1provided by VGNC
    Primary source
    VGNC:VGNC:106244
    Locus tag
    EGK_05071
    See related
    Ensembl:ENSMMUG00000040529
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VSNL1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (91310969..91426414, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (17490168..17606309)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992848 Neighboring gene GEN1 Holliday junction 5' flap endonuclease Neighboring gene structural maintenance of chromosomes 6 Neighboring gene uncharacterized LOC106992846 Neighboring gene RAD51 associated protein 2 Neighboring gene 26S proteasome regulatory subunit 4 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    visinin-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      91310969..91426414 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831957.1 → XP_028687790.1  visinin-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZEM5
      Related
      ENSMMUP00000063088.1, ENSMMUT00000087481.1
      Conserved Domains (1) summary
      COG5126
      Location:87 → 253
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_015111752.2 → XP_014967238.1  visinin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QXX9, A0A5F7ZKS9, A0A8J8Y5U9, G7N9F6
      Related
      ENSMMUP00000077405.1, ENSMMUT00000081546.1
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_015111750.2 → XP_014967236.1  visinin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QXX9, A0A5F7ZKS9, A0A8J8Y5U9, G7N9F6
      Related
      ENSMMUP00000061392.1, ENSMMUT00000100831.1
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_015111751.2 → XP_014967237.1  visinin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QXX9, A0A5F7ZKS9, A0A8J8Y5U9, G7N9F6
      Related
      ENSMMUP00000052909.1, ENSMMUT00000070756.2
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    5. XM_015111753.2 → XP_014967239.1  visinin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QXX9, A0A5F7ZKS9, A0A8J8Y5U9, G7N9F6
      Related
      ENSMMUP00000068265.1, ENSMMUT00000099382.1
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    6. XM_028831959.1 → XP_028687792.1  visinin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QXX9, A0A5F7ZKS9, A0A8J8Y5U9, G7N9F6
      Related
      ENSMMUP00000069962.1, ENSMMUT00000089922.1
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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