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    XYLT1 xylosyltransferase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718187, updated on 17-Aug-2024

    Summary

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    Official Symbol
    XYLT1provided by VGNC
    Official Full Name
    xylosyltransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:78977
    See related
    Ensembl:ENSMMUG00000017131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See XYLT1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (16748507..17118895)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (17063062..17433499)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene nodal modulator 1 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC114674375 Neighboring gene uncharacterized LOC114674374 Neighboring gene UPF0454 protein C12orf49-like Neighboring gene uncharacterized LOC114674335

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heparan sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylosyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      16748507..17118895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125707.2 → XP_014981193.1  xylosyltransferase 1

      UniProtKB/TrEMBL
      F7H2Y6, H9F649
      Related
      ENSMMUP00000022537.3, ENSMMUT00000024084.4
      Conserved Domains (2) summary
      pfam12529
      Location:613 → 793
      Xylo_C; Xylosyltransferase C terminal
      cl27418
      Location:328 → 580
      Branch; Core-2/I-Branching enzyme
    Nucleotide Protein
    Heading Accession and Version

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