U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SCARA5 scavenger receptor class A member 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713377, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SCARA5provided by VGNC
    Official Full Name
    scavenger receptor class A member 5provided by VGNC
    Primary source
    VGNC:VGNC:77117
    See related
    Ensembl:ENSMMUG00000022044
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SCARA5 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (28134135..28257453, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (27887223..28010680, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene establishment of sister chromatid cohesion N-acetyltransferase 2 Neighboring gene PDZ binding kinase Neighboring gene nuclear GTPase, germinal center associated Neighboring gene uncharacterized LOC114680212 Neighboring gene elongator acetyltransferase complex subunit 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ferritin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in iron ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    scavenger receptor class A member 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      28134135..28257453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145043.2 → XP_015000529.1  scavenger receptor class A member 5

      UniProtKB/TrEMBL
      A0A5F8AFJ3, F7HRA1
      Related
      ENSMMUP00000029036.4, ENSMMUT00000031020.4
      Conserved Domains (4) summary
      pfam01391
      Location:316 → 374
      Collagen; Collagen triple helix repeat (20 copies)
      smart00202
      Location:394 → 494
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:399 → 494
      SRCR; Scavenger receptor cysteine-rich domain
      pfam08496
      Location:68 → 116
      Peptidase_S49_N; Peptidase family S49 N-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials