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    XRN2 5'-3' exoribonuclease 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700934, updated on 17-Aug-2024

    Summary

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    Official Symbol
    XRN2provided by VGNC
    Official Full Name
    5'-3' exoribonuclease 2provided by VGNC
    Primary source
    VGNC:VGNC:78814
    See related
    Ensembl:ENSMMUG00000011405
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See XRN2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (45129188..45217388, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (54434944..54522910)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000508 Neighboring gene NK2 homeobox 4 Neighboring gene uncharacterized LOC114670434 Neighboring gene uncharacterized LOC107000507 Neighboring gene kizuna centrosomal protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' RNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-3' exoribonuclease 2
    XP_015005073.1
    XP_015005074.2
    XP_015005075.1
    XP_028683965.1
    XP_028683966.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      45129188..45217388 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149587.2 → XP_015005073.1  5'-3' exoribonuclease 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QBM0, F6VZ85, G7N332, H9FRE3
      Related
      ENSMMUP00000045439.2, ENSMMUT00000056267.2
      Conserved Domains (1) summary
      cl27292
      Location:1 → 787
      XRN_N; XRN 5'-3' exonuclease N-terminus

    2. XM_015149588.2 → XP_015005074.2  5'-3' exoribonuclease 2 isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z8G3, A0A5K1UWP0
      Related
      ENSMMUP00000014968.4, ENSMMUT00000015973.4
      Conserved Domains (1) summary
      COG5049
      Location:138 → 773
      XRN1; 5'-3' exonuclease [Replication, recombination and repair]

    3. XM_028828133.1 → XP_028683966.1  5'-3' exoribonuclease 2 isoform X4

      UniProtKB/TrEMBL
      G7N332
      Conserved Domains (1) summary
      COG5049
      Location:1 → 711
      XRN1; 5'-3' exonuclease [Replication, recombination and repair]

    4. XM_028828132.1 → XP_028683965.1  5'-3' exoribonuclease 2 isoform X3

      UniProtKB/TrEMBL
      G7N332
      Conserved Domains (1) summary
      COG5049
      Location:1 → 733
      XRN1; 5'-3' exonuclease [Replication, recombination and repair]

    5. XM_015149589.2 → XP_015005075.1  5'-3' exoribonuclease 2 isoform X3

      UniProtKB/TrEMBL
      G7N332
      Conserved Domains (1) summary
      COG5049
      Location:1 → 733
      XRN1; 5'-3' exonuclease [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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