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    SBF1 SET binding factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715955, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SBF1provided by VGNC
    Official Full Name
    SET binding factor 1provided by VGNC
    Primary source
    VGNC:VGNC:98440
    See related
    Ensembl:ENSMMUG00000009082
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SBF1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (990363..1044163)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (92469950..92496343, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene thymidine phosphorylase Neighboring gene non-SMC condensin II complex subunit H2 Neighboring gene lipase maturation factor 2 Neighboring gene myo-inositol oxygenase Neighboring gene adrenomedullin 2 Neighboring gene protein phosphatase 6 regulatory subunit 2 Neighboring gene DENN domain containing 6B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    myotubularin-related protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      990363..1044163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827515.1 → XP_028683348.1  myotubularin-related protein 5 isoform X1

      UniProtKB/TrEMBL
      G7N4E7
      Conserved Domains (8) summary
      smart00801
      Location:526 → 594
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:283 → 472
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:159 → 239
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      PHA03247
      Location:34 → 156
      PHA03247; large tegument protein UL36; Provisional
      cd01235
      Location:1948 → 2053
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      pfam12335
      Location:705 → 926
      SBF2; Myotubularin protein
      cl17171
      Location:1055 → 1173
      PH-like; Pleckstrin homology-like domain
      cl28904
      Location:1312 → 1684
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    2. XM_028827517.1 → XP_028683350.1  myotubularin-related protein 5 isoform X3

      UniProtKB/TrEMBL
      G7N4E7
      Conserved Domains (8) summary
      smart00801
      Location:526 → 594
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:283 → 472
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:159 → 239
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      PHA03247
      Location:34 → 156
      PHA03247; large tegument protein UL36; Provisional
      cd01235
      Location:1922 → 2027
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      pfam12335
      Location:705 → 926
      SBF2; Myotubularin protein
      cl17171
      Location:1055 → 1173
      PH-like; Pleckstrin homology-like domain
      cl28904
      Location:1312 → 1658
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    3. XM_028827516.1 → XP_028683349.1  myotubularin-related protein 5 isoform X2

      UniProtKB/TrEMBL
      G7N4E7
      Conserved Domains (8) summary
      smart00801
      Location:517 → 585
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:282 → 463
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:159 → 239
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      PHA03247
      Location:34 → 156
      PHA03247; large tegument protein UL36; Provisional
      cd01235
      Location:1939 → 2044
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      pfam12335
      Location:696 → 917
      SBF2; Myotubularin protein
      cl17171
      Location:1046 → 1164
      PH-like; Pleckstrin homology-like domain
      cl28904
      Location:1303 → 1675
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    4. XM_028827518.1 → XP_028683351.1  myotubularin-related protein 5 isoform X5

      UniProtKB/TrEMBL
      G7N4E7
      Conserved Domains (7) summary
      smart00801
      Location:365 → 433
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:130 → 311
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1761 → 1866
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd14588
      Location:1151 → 1497
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5
      pfam12335
      Location:544 → 765
      SBF2; Myotubularin protein
      cl17171
      Location:894 → 1012
      PH-like; Pleckstrin homology-like domain

    5. XM_015150656.2 → XP_015006142.2  myotubularin-related protein 5 isoform X4

      UniProtKB/TrEMBL
      G7N4E7, H9FY86
      Related
      ENSMMUP00000010544.4, ENSMMUT00000011249.4
      Conserved Domains (7) summary
      smart00801
      Location:364 → 432
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:129 → 310
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1786 → 1891
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      pfam12335
      Location:543 → 764
      SBF2; Myotubularin protein
      cl17171
      Location:893 → 1011
      PH-like; Pleckstrin homology-like domain
      cl28904
      Location:1150 → 1522
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    6. XM_015150658.2 → XP_015006144.2  myotubularin-related protein 5 isoform X6

      UniProtKB/TrEMBL
      G7N4E7
      Related
      ENSMMUP00000011923.4, ENSMMUT00000012714.4
      Conserved Domains (7) summary
      smart00801
      Location:364 → 432
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:129 → 310
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1760 → 1865
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      pfam12335
      Location:543 → 764
      SBF2; Myotubularin protein
      cd14588
      Location:1150 → 1496
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5
      cl17171
      Location:893 → 1011
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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