U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MRPL53 mitochondrial ribosomal protein L53 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709302, updated on 19-Nov-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    MRPL53
    Gene description
    mitochondrial ribosomal protein L53
    Locus tag
    EGK_05470
    See related
    Ensembl:ENSMMUG00000002725
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MRPL53 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34332599..34344269)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75490933..75502496, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 1 Neighboring gene ladybird homeobox 2 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene WW domain binding protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    39S ribosomal protein L53, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194467.2 → NP_001181396.1  39S ribosomal protein L53, mitochondrial

      See identical proteins and their annotated locations for NP_001181396.1

      Status: VALIDATED

      Source sequence(s)
      QNVO02000095
      UniProtKB/TrEMBL
      A0A8J8XPN7, G7NAE4, H9FPM7
      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34332599..34344269
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112548.2 → XP_014968034.2  39S ribosomal protein L53, mitochondrial isoform X7

      Conserved Domains (1) summary
      pfam14923
      Location:328 → 739
      CCDC142; Coiled-coil protein 142

    2. XM_015112544.2 → XP_014968030.2  39S ribosomal protein L53, mitochondrial isoform X1

      Conserved Domains (2) summary
      pfam14923
      Location:328 → 697
      CCDC142; Coiled-coil protein 142
      pfam10780
      Location:772 → 823
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    3. XM_015112547.2 → XP_014968033.2  39S ribosomal protein L53, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam14923
      Location:328 → 697
      CCDC142; Coiled-coil protein 142

    4. XM_028831564.1 → XP_028687397.1  39S ribosomal protein L53, mitochondrial isoform X4

      Conserved Domains (2) summary
      pfam14923
      Location:328 → 659
      CCDC142; Coiled-coil protein 142
      pfam10780
      Location:734 → 785
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    5. XM_015112546.2 → XP_014968032.2  39S ribosomal protein L53, mitochondrial isoform X2

      Conserved Domains (2) summary
      pfam14923
      Location:328 → 690
      CCDC142; Coiled-coil protein 142
      pfam10780
      Location:765 → 816
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    6. XM_028831563.1 → XP_028687396.1  39S ribosomal protein L53, mitochondrial isoform X3

      Conserved Domains (2) summary
      pfam14923
      Location:328 → 668
      CCDC142; Coiled-coil protein 142
      pfam10780
      Location:743 → 794
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    7. XM_001109550.4 → XP_001109550.3  39S ribosomal protein L53, mitochondrial isoform X6

      Related
      ENSMMUP00000075404.1, ENSMMUT00000097194.1
      Conserved Domains (1) summary
      pfam14923
      Location:328 → 746
      CCDC142; Coiled-coil protein 142
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.