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    DDX18 DEAD-box helicase 18 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693278, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX18provided by VGNC
    Official Full Name
    DEAD-box helicase 18provided by VGNC
    Primary source
    VGNC:VGNC:84227
    See related
    Ensembl:ENSMMUG00000021343
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX18 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (13282675..13300871, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (13383417..13401287, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 5B Neighboring gene uncharacterized LOC106992547 Neighboring gene uncharacterized LOC106992548 Neighboring gene uncharacterized LOC106992549

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DDX18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      13282675..13300871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015109944.2 → XP_014965430.2  ATP-dependent RNA helicase DDX18 isoform X1

      UniProtKB/TrEMBL
      H9G1D5, I2CTC7
      Related
      ENSMMUP00000066362.1, ENSMMUT00000101276.1
      Conserved Domains (2) summary
      COG0513
      Location:177 → 590
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17942
      Location:190 → 387
      DEADc_DDX18; DEAD-box helicase domain of DEAD box protein 18

    2. XM_015109945.2 → XP_014965431.2  ATP-dependent RNA helicase DDX18 isoform X2

      UniProtKB/TrEMBL
      H9G1D5
      Conserved Domains (2) summary
      PRK01297
      Location:120 → 518
      PRK01297; ATP-dependent RNA helicase RhlB; Provisional
      cd17942
      Location:190 → 387
      DEADc_DDX18; DEAD-box helicase domain of DEAD box protein 18
    Nucleotide Protein
    Heading Accession and Version

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