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    SYDE1 synapse defective Rho GTPase homolog 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719089, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYDE1provided by VGNC
    Official Full Name
    synapse defective Rho GTPase homolog 1provided by VGNC
    Primary source
    VGNC:VGNC:112057
    See related
    Ensembl:ENSMMUG00000007726
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYDE1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (14706953..14714827)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (15006769..15014614)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994652 Neighboring gene caspase 14 Neighboring gene olfactory receptor family 1 subfamily I member 1 Neighboring gene ilvB acetolactate synthase like Neighboring gene notch receptor 3 Neighboring gene epoxide hydrolase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho GTPase-activating protein SYDE1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      14706953..14714827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840067.1 → XP_028695900.1  rho GTPase-activating protein SYDE1 isoform X2

      Conserved Domains (1) summary
      cl02570
      Location:329 → 534
      RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...

    2. XM_015123165.2 → XP_014978651.1  rho GTPase-activating protein SYDE1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RL23
      Related
      ENSMMUP00000061018.2, ENSMMUT00000070361.2
      Conserved Domains (1) summary
      cl02570
      Location:396 → 601
      RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
    Nucleotide Protein
    Heading Accession and Version

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