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    BAZ1B bromodomain adjacent to zinc finger domain 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716436, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BAZ1Bprovided by VGNC
    Official Full Name
    bromodomain adjacent to zinc finger domain 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:70231
    See related
    Ensembl:ENSMMUG00000014270
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BAZ1B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (45782518..45865644, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (42001181..42082791, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997356 Neighboring gene frizzled class receptor 9 Neighboring gene BAF chromatin remodeling complex subunit BCL7B Neighboring gene transducin beta like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H2AXY142 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of WICH complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein kinase BAZ1B
    NP_001248572.1
    XP_028700896.1
    XP_028700897.1
    XP_028700898.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261643.1 → NP_001248572.1  tyrosine-protein kinase BAZ1B

      See identical proteins and their annotated locations for NP_001248572.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044036
      UniProtKB/TrEMBL
      A0A5F8A4T7, F7ETW7
      Related
      ENSMMUP00000071919.1, ENSMMUT00000085832.1
      Conserved Domains (7) summary
      cd05505
      Location:1344 → 1440
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1186 → 1231
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam15613
      Location:898 → 1025
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:664 → 877
      DUF5401; Family of unknown function (DUF5401)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      45782518..45865644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845064.1 → XP_028700897.1  tyrosine-protein kinase BAZ1B isoform X2

      UniProtKB/TrEMBL
      F7ETW7, I0FW74
      Conserved Domains (7) summary
      cd05505
      Location:1342 → 1438
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:602 → 666
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1184 → 1229
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam15613
      Location:896 → 1023
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:725 → 765
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:662 → 875
      DUF5401; Family of unknown function (DUF5401)

    2. XM_028845065.1 → XP_028700898.1  tyrosine-protein kinase BAZ1B isoform X3

      UniProtKB/TrEMBL
      A0A5F7Z8C2, F7ETW7
      Related
      ENSMMUP00000061763.1, ENSMMUT00000097299.1
      Conserved Domains (8) summary
      cd05505
      Location:1278 → 1374
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:538 → 602
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1120 → 1165
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam05110
      Location:206 → 430
      AF-4; AF-4 proto-oncoprotein
      pfam15613
      Location:832 → 959
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:661 → 701
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:598 → 811
      DUF5401; Family of unknown function (DUF5401)

    3. XM_028845063.1 → XP_028700896.1  tyrosine-protein kinase BAZ1B isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4T7, F7ETW7
      Conserved Domains (7) summary
      cd05505
      Location:1344 → 1440
      Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
      smart00571
      Location:604 → 668
      DDT; domain in different transcription and chromosome remodeling factors
      cd15628
      Location:1186 → 1231
      PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
      pfam15613
      Location:898 → 1025
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam10537
      Location:21 → 120
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15612
      Location:727 → 767
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:664 → 877
      DUF5401; Family of unknown function (DUF5401)
    Nucleotide Protein
    Heading Accession and Version

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