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    frc fringe connection [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39943, updated on 9-Dec-2024

    Summary

    Official Symbol
    frcprovided by FlyBase
    Official Full Name
    fringe connectionprovided by FlyBase
    Primary source
    FLYBASE:FBgn0042641
    Locus tag
    Dmel_CG3874
    See related
    AllianceGenome:FB:FBgn0042641
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0172774.5; anon-WO0172774.7; CG3874; dFRC; Dmel\CG3874; Frc; FRC; l(3)00073; l(3)02619; l(3)10098; l(3)j2E3; l(3)L6750; l(3)S070006; UDP-GlcNAc/UDP-GlcUA; ust74C; UST74C
    Summary
    Enables antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Involved in several processes, including imaginal disc-derived wing morphogenesis; pyrimidine nucleotide-sugar transmembrane transport; and regionalization. Located in Golgi medial cisterna. Is expressed in adult fat body; adult head; and organism. Human ortholog(s) of this gene implicated in schneckenbecken dysplasia. Orthologous to several human genes including SLC35D1 (solute carrier family 35 member D1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See frc in Genome Data Viewer
    Location:
    74B5-74C1; 3-45 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17428936..17433190, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17422036..17426290, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit G Neighboring gene Golgin, RAB6 interacting Neighboring gene Coenzyme Q4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables GDP-fucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT enables GDP-mannose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables UDP-N-acetylgalactosamine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables UDP-N-acetylglucosamine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables UDP-N-acetylglucosamine transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT enables UDP-galactose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables UDP-galactose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT enables UDP-glucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables UDP-glucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables UDP-glucuronic acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables UDP-glucuronic acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables UDP-xylose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables antiporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi medial cisterna IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    fringe connection
    Names
    CG3874-PA
    CG3874-PB
    Fringe-connection
    UDP-sugar transporter in 74C
    frc-PA
    frc-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      17428936..17433190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144490.3NP_001137962.1  fringe connection, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137962.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95YI5, Q9VVG8
      UniProtKB/TrEMBL
      B7Z066
      Conserved Domains (1) summary
      pfam03151
      Location:67348
      TPT; Triose-phosphate Transporter family
    2. NM_079402.4NP_524126.1  fringe connection, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524126.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95YI5, Q9VVG8
      UniProtKB/TrEMBL
      B7Z066
      Related
      FBpp0074990
      Conserved Domains (1) summary
      pfam03151
      Location:67348
      TPT; Triose-phosphate Transporter family