U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TTC39A tetratricopeptide repeat domain 39A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712187, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TTC39Aprovided by VGNC
    Official Full Name
    tetratricopeptide repeat domain 39Aprovided by VGNC
    Primary source
    VGNC:VGNC:79160
    See related
    Ensembl:ENSMMUG00000004564
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TTC39A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (173138496..173181811)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (50849152..50892801, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15 Neighboring gene U6 spliceosomal RNA Neighboring gene 26S proteasome non-ATPase regulatory subunit 7 pseudogene Neighboring gene ring finger protein 11 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tetratricopeptide repeat protein 39A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      173138496..173181811
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833928.1 → XP_028689761.1  tetratricopeptide repeat protein 39A isoform X2

      UniProtKB/TrEMBL
      F6RY30
      Related
      ENSMMUP00000006065.4, ENSMMUT00000006451.4
      Conserved Domains (2) summary
      pfam13424
      Location:466 → 541
      TPR_12; Tetratricopeptide repeat
      pfam10300
      Location:27 → 481
      DUF3808; Protein of unknown function (DUF3808)

    2. XM_002801567.3 → XP_002801613.1  tetratricopeptide repeat protein 39A isoform X3

      UniProtKB/TrEMBL
      F6RY30
      Conserved Domains (2) summary
      pfam13424
      Location:440 → 515
      TPR_12; Tetratricopeptide repeat
      pfam10300
      Location:1 → 455
      DUF3808; Protein of unknown function (DUF3808)

    3. XM_001111084.4 → XP_001111084.1  tetratricopeptide repeat protein 39A isoform X1

      See identical proteins and their annotated locations for XP_001111084.1

      UniProtKB/TrEMBL
      F6RY03, F7GSI7
      Related
      ENSMMUP00000006066.4, ENSMMUT00000006452.4
      Conserved Domains (2) summary
      pfam10300
      Location:29 → 483
      DUF3808; Protein of unknown function (DUF3808)
      pfam13424
      Location:477 → 543
      TPR_12; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials