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    SEC23IP SEC23 interacting protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704155, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SEC23IPprovided by VGNC
    Official Full Name
    SEC23 interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77255
    See related
    Ensembl:ENSMMUG00000009561
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SEC23IP in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (120377810..120429642)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (115862722..115912821)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-5-phosphatase F Neighboring gene minichromosome maintenance complex binding protein Neighboring gene U6 spliceosomal RNA Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene nascent polypeptide-associated complex subunit alpha pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SEC23-interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      120377810..120429642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001100615.4 → XP_001100615.2  SEC23-interacting protein isoform X1

      UniProtKB/TrEMBL
      F6Y7K1, G7N197
      Related
      ENSMMUP00000012499.4, ENSMMUT00000013341.4
      Conserved Domains (2) summary
      cd09584
      Location:638 → 702
      SAM_sec23ip; SAM domain of sec23ip
      pfam02862
      Location:782 → 988
      DDHD; DDHD domain

    2. XM_015148325.2 → XP_015003811.2  SEC23-interacting protein isoform X2

      UniProtKB/TrEMBL
      G7N197
      Related
      ENSMMUP00000035587.3, ENSMMUT00000042577.3
      Conserved Domains (2) summary
      cd09584
      Location:638 → 702
      SAM_sec23ip; SAM domain of sec23ip
      pfam02862
      Location:782 → 987
      DDHD; DDHD domain

    RNA

    1. XR_003719511.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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