U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    USP54 ubiquitin specific peptidase 54 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706859, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    USP54provided by VGNC
    Official Full Name
    ubiquitin specific peptidase 54provided by VGNC
    Primary source
    VGNC:VGNC:106116
    See related
    Ensembl:ENSMMUG00000001821
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See USP54 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (64100192..64218561)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (58675918..58799704)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene synaptopodin 2 like Neighboring gene myozenin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107000156 Neighboring gene protein phosphatase 3 catalytic subunit beta Neighboring gene MSS51 mitochondrial translational activator

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    inactive ubiquitin carboxyl-terminal hydrolase 54
    Names
    inactive ubiquitin carboxyl-terminal hydrolase 54-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      64100192..64218561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015147299.2 → XP_015002785.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    2. XM_015147303.2 → XP_015002789.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    3. XM_028826473.1 → XP_028682306.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X12

      Conserved Domains (1) summary
      pfam00443
      Location:32 → 330
      UCH; Ubiquitin carboxyl-terminal hydrolase

    4. XM_028826465.1 → XP_028682298.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X3

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    5. XM_028826472.1 → XP_028682305.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X9

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 128
      UCH; Ubiquitin carboxyl-terminal hydrolase

    6. XM_015147300.2 → XP_015002786.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    7. XM_028826467.1 → XP_028682300.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X4

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    8. XM_028826464.1 → XP_028682297.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X2

      UniProtKB/TrEMBL
      F7GS81, G7N259, H9FQJ9
      Related
      ENSMMUP00000002422.3, ENSMMUT00000002561.4
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    9. XM_028826469.1 → XP_028682302.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X6

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    10. XM_028826471.1 → XP_028682304.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X8

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    11. XM_028826459.1 → XP_028682292.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    12. XM_028826463.1 → XP_028682296.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    13. XM_028826468.1 → XP_028682301.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X5

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    14. XM_028826470.1 → XP_028682303.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X7

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    15. XM_028826461.1 → XP_028682294.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    16. XM_028826462.1 → XP_028682295.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    17. XM_015147304.2 → XP_015002790.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    18. XM_015147297.2 → XP_015002783.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    19. XM_015147302.2 → XP_015002788.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    20. XM_015147301.2 → XP_015002787.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      pfam00443
      Location:32 → 349
      UCH; Ubiquitin carboxyl-terminal hydrolase

    21. XM_015147312.2 → XP_015002798.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X10

      UniProtKB/TrEMBL
      G7N259
      Conserved Domains (1) summary
      cd02257
      Location:86 → 153
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

    22. XM_015147313.2 → XP_015002799.1  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X11

      Conserved Domains (1) summary
      cd02257
      Location:43 → 110
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials