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    AGFG1 ArfGAP with FG repeats 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708910, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AGFG1provided by VGNC
    Official Full Name
    ArfGAP with FG repeats 1provided by VGNC
    Primary source
    VGNC:VGNC:69816
    See related
    Ensembl:ENSMMUG00000013247
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    HRB
    Orthologs
    human mouse all
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    Genomic context

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    See AGFG1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (114919900..115009752)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (109845251..109935129)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission factor Neighboring gene transmembrane 4 L six family member 20 Neighboring gene ice-structuring protein-like Neighboring gene thiamine transporter 2-like Neighboring gene COP9 signalosome complex subunit 9 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arf-GAP domain and FG repeat-containing protein 1
    Names
    HIV-1 Rev binding protein
    arf-GAP domain and FG repeats-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      114919900..115009752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831167.1 → XP_028687000.1  arf-GAP domain and FG repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q2I2, G7N932
      Related
      ENSMMUP00000042244.2, ENSMMUT00000072275.2
      Conserved Domains (3) summary
      COG5347
      Location:8 → 319
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:434 → 554
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    2. XM_028831168.1 → XP_028687001.1  arf-GAP domain and FG repeat-containing protein 1 isoform X2

      Conserved Domains (3) summary
      COG5347
      Location:8 → 319
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:434 → 566
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    3. XM_028831169.1 → XP_028687002.1  arf-GAP domain and FG repeat-containing protein 1 isoform X3

      Conserved Domains (2) summary
      COG5347
      Location:8 → 319
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    4. XM_015111217.2 → XP_014966703.2  arf-GAP domain and FG repeat-containing protein 1 isoform X4

      Conserved Domains (3) summary
      COG5347
      Location:8 → 319
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:434 → 550
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    5. XM_028831175.1 → XP_028687008.1  arf-GAP domain and FG repeat-containing protein 1 isoform X10

      UniProtKB/TrEMBL
      H9EP20
      Conserved Domains (3) summary
      COG5347
      Location:8 → 306
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:410 → 526
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    6. XM_028831177.1 → XP_028687010.1  arf-GAP domain and FG repeat-containing protein 1 isoform X12

      UniProtKB/TrEMBL
      F6ZJK0, H9EP21
      Related
      ENSMMUP00000017420.4, ENSMMUT00000018599.4
      Conserved Domains (1) summary
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    7. XM_028831178.1 → XP_028687011.1  arf-GAP domain and FG repeat-containing protein 1 isoform X13

      Conserved Domains (2) summary
      PRK12727
      Location:370 → 486
      PRK12727; flagellar biosynthesis regulator FlhF; Provisional
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    8. XM_028831171.1 → XP_028687004.1  arf-GAP domain and FG repeat-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      F6SVJ9, G7N932
      Related
      ENSMMUP00000037461.3, ENSMMUT00000044444.3
      Conserved Domains (3) summary
      COG5347
      Location:8 → 306
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:410 → 530
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    9. XM_028831174.1 → XP_028687007.1  arf-GAP domain and FG repeat-containing protein 1 isoform X9

      Conserved Domains (2) summary
      PRK12727
      Location:394 → 514
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    10. XM_028831176.1 → XP_028687009.1  arf-GAP domain and FG repeat-containing protein 1 isoform X11

      Conserved Domains (2) summary
      PRK12727
      Location:370 → 490
      PRK12727; flagellar biosynthesis protein FlhF
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    11. XM_028831173.1 → XP_028687006.1  arf-GAP domain and FG repeat-containing protein 1 isoform X8

      UniProtKB/TrEMBL
      H9EP22
      Conserved Domains (2) summary
      COG5347
      Location:8 → 306
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      cd08857
      Location:13 → 128
      ArfGap_AGFG1; ArfGAP domain of AGFG1 (ArfGAP domain and FG repeat-containing protein 1)

    12. XM_028831172.1 → XP_028687005.1  arf-GAP domain and FG repeat-containing protein 1 isoform X7

      UniProtKB/TrEMBL
      G7N932
      Conserved Domains (3) summary
      COG5347
      Location:30 → 285
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:400 → 520
      PRK12727; flagellar biosynthesis regulator FlhF; Provisional
      cl28907
      Location:23 → 94
      ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)

    13. XM_028831170.1 → XP_028687003.1  arf-GAP domain and FG repeat-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      G7N932
      Conserved Domains (3) summary
      COG5347
      Location:19 → 301
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      PRK12727
      Location:416 → 536
      PRK12727; flagellar biosynthesis protein FlhF
      cl28907
      Location:32 → 110
      ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)
    Nucleotide Protein
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