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    UBR3 ubiquitin protein ligase E3 component n-recognin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710524, updated on 17-Aug-2024

    Summary

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    Official Symbol
    UBR3provided by VGNC
    Official Full Name
    ubiquitin protein ligase E3 component n-recognin 3provided by VGNC
    Primary source
    VGNC:VGNC:99419
    See related
    Ensembl:ENSMMUG00000023062
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See UBR3 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (56940707..57209070)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (56793492..57063691)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene small RNA binding exonuclease protection factor La Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene mitochondrial pyruvate carrier 2 pseudogene Neighboring gene ribosome biogenesis protein NSA2 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L15 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase UBR3
    Names
    ubiquitin protein ligase E3 component n-recognin 3 (putative)
    XP_014965827.1
    XP_014965828.1
    XP_014965829.1
    XP_014965830.1
    XP_014965831.1
    XP_014965832.1
    XP_014965833.1
    XP_028686661.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      56940707..57209070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110347.2 → XP_014965833.1  E3 ubiquitin-protein ligase UBR3 isoform X8

      UniProtKB/TrEMBL
      H9F983
      Conserved Domains (1) summary
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    2. XM_015110341.2 → XP_014965827.1  E3 ubiquitin-protein ligase UBR3 isoform X1

      UniProtKB/TrEMBL
      H9F983
      Conserved Domains (1) summary
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    3. XM_015110342.2 → XP_014965828.1  E3 ubiquitin-protein ligase UBR3 isoform X2

      UniProtKB/TrEMBL
      H9F983
      Conserved Domains (3) summary
      cd16483
      Location:1244 → 1382
      RING-H2_UBR3; RING finger, H2 subclass, found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)
      pfam18995
      Location:1440 → 1885
      PRT6_C; Proteolysis_6 C-terminal

    4. XM_015110343.2 → XP_014965829.1  E3 ubiquitin-protein ligase UBR3 isoform X3

      UniProtKB/TrEMBL
      F6UZY7, H9F983
      Related
      ENSMMUP00000030365.4, ENSMMUT00000032452.4
      Conserved Domains (1) summary
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    5. XM_015110344.2 → XP_014965830.1  E3 ubiquitin-protein ligase UBR3 isoform X4

      UniProtKB/TrEMBL
      H9F983
      Conserved Domains (1) summary
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    6. XM_015110345.2 → XP_014965831.1  E3 ubiquitin-protein ligase UBR3 isoform X5

      UniProtKB/TrEMBL
      F7GM61, H9F983
      Related
      ENSMMUP00000038184.3, ENSMMUT00000045169.3
      Conserved Domains (1) summary
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    7. XM_028830828.1 → XP_028686661.1  E3 ubiquitin-protein ligase UBR3 isoform X6

      UniProtKB/TrEMBL
      H9F983
      Conserved Domains (2) summary
      cd16483
      Location:1245 → 1383
      RING-H2_UBR3; RING finger, H2 subclass, found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)

    8. XM_015110346.2 → XP_014965832.1  E3 ubiquitin-protein ligase UBR3 isoform X7

      Conserved Domains (2) summary
      cd16483
      Location:1245 → 1383
      RING-H2_UBR3; RING finger, H2 subclass, found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins
      pfam02207
      Location:120 → 187
      zf-UBR; Putative zinc finger in N-recognin (UBR box)
    Nucleotide Protein
    Heading Accession and Version

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