U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GTF2E2 general transcription factor IIE subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694622, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GTF2E2provided by VGNC
    Official Full Name
    general transcription factor IIE subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:73308
    Locus tag
    EGK_18823
    See related
    Ensembl:ENSMMUG00000000459
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GTF2E2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (30870906..30954499, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (30637661..30721337, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor IIA subunit 2 pseudogene Neighboring gene RNA binding protein, mRNA processing factor Neighboring gene uncharacterized LOC114680219 Neighboring gene elongin-B pseudogene Neighboring gene U5 spliceosomal RNA Neighboring gene small integral membrane protein 18 Neighboring gene 40S ribosomal protein S26-like Neighboring gene glutathione-disulfide reductase Neighboring gene transcription initiation factor TFIID subunit 11-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription initiation factor IIE subunit beta
    Names
    general transcription factor IIE, polypeptide 2, beta 34kDa

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260927.1 → NP_001247856.1  transcription initiation factor IIE subunit beta

      See identical proteins and their annotated locations for NP_001247856.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043745
      UniProtKB/TrEMBL
      A0A1D5RFA6, A0A5S6R801, A0A8J8XJ30, G7N0U2, H9Z044
      Related
      ENSMMUP00000059000.2, ENSMMUT00000060033.2
      Conserved Domains (2) summary
      cd07977
      Location:68 → 146
      TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
      pfam18121
      Location:146 → 204
      TFA2_Winged_2; TFA2 Winged helix domain 2

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      30870906..30954499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.