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    PDZD2 PDZ domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696141, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PDZD2provided by VGNC
    Official Full Name
    PDZ domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:75829
    See related
    Ensembl:ENSMMUG00000013954
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PDZD2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (31749989..32226596)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (32279240..32765561)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S26-like Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L5-like Neighboring gene translationally-controlled tumor protein pseudogene Neighboring gene uncharacterized LOC114678763 Neighboring gene golgi phosphoprotein 3 Neighboring gene translation initiation factor IF-2-like Neighboring gene 60S ribosomal protein L27 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PDZ domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      31749989..32226596
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139787.2 → XP_014995273.2  PDZ domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      G7MV17
      Conserved Domains (3) summary
      smart00228
      Location:2753 → 2835
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1247 → 1714
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:589 → 670
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    2. XM_028849365.1 → XP_028705198.1  PDZ domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A1I2
      Conserved Domains (3) summary
      smart00228
      Location:2682 → 2764
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1176 → 1643
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:518 → 599
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    3. XM_015139788.2 → XP_014995274.2  PDZ domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZDL9, A0A5F8A1I2
      Related
      ENSMMUP00000063677.1, ENSMMUT00000105584.1
      Conserved Domains (3) summary
      smart00228
      Location:2661 → 2743
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1155 → 1622
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:497 → 578
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    4. XM_028849364.1 → XP_028705197.1  PDZ domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      G7MV17
      Related
      ENSMMUP00000074216.1, ENSMMUT00000099735.1
      Conserved Domains (3) summary
      smart00228
      Location:2753 → 2835
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1247 → 1714
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:589 → 670
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    5. XM_015139789.2 → XP_014995275.2  PDZ domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      G7MV17
      Conserved Domains (3) summary
      smart00228
      Location:2579 → 2661
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1073 → 1540
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:415 → 496
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    6. XM_015139791.2 → XP_014995277.2  PDZ domain-containing protein 2 isoform X5

      UniProtKB/TrEMBL
      G7MV17
      Conserved Domains (3) summary
      smart00228
      Location:2422 → 2504
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:916 → 1383
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:258 → 339
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    7. XM_015139790.2 → XP_014995276.2  PDZ domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      G7MV17
      Conserved Domains (3) summary
      smart00228
      Location:2579 → 2661
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      PHA03247
      Location:1073 → 1540
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:415 → 496
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    Nucleotide Protein
    Heading Accession and Version

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