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    SEPTIN4 septin 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714724, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SEPTIN4
    Gene description
    septin 4
    Locus tag
    EGK_08583
    See related
    Ensembl:ENSMMUG00000008423
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SEPT4; C16H17orf47
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN4 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (38261249..38285311)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (31105349..31129408)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene testis expressed 14, intercellular bridge forming factor Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC114673117 Neighboring gene uncharacterized LOC114673116 Neighboring gene myotubularin related protein 4 Neighboring gene protein SET-like Neighboring gene heat shock transcription factor 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm annulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    septin-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      38261249..38285311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119145.2 → XP_014974631.2  septin-4 isoform X1

      Conserved Domains (2) summary
      pfam00735
      Location:671 → 943
      Septin
      pfam15548
      Location:13 → 545
      DUF4655; Domain of unknown function (DUF4655)

    2. XM_015119147.2 → XP_014974633.1  septin-4 isoform X3

      UniProtKB/TrEMBL
      A0A1D5R063
      Related
      ENSMMUP00000053696.1, ENSMMUT00000070323.2
      Conserved Domains (3) summary
      COG5019
      Location:105 → 457
      CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
      pfam00735
      Location:122 → 395
      Septin; Septin
      pfam12526
      Location:16 → 95
      DUF3729; Protein of unknown function (DUF3729)

    3. XM_028836273.1 → XP_028692106.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    4. XM_028836268.1 → XP_028692101.1  septin-4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QZS1, A0A8J8XB46, F6VBY7, F6VBZ5, G7NHX7
      Related
      ENSMMUP00000011042.3, ENSMMUT00000011775.4
      Conserved Domains (1) summary
      pfam00735
      Location:142 → 414
      Septin

    5. XM_028836269.1 → XP_028692102.1  septin-4 isoform X4

      UniProtKB/TrEMBL
      F7HQ68
      Conserved Domains (1) summary
      pfam00735
      Location:42 → 322
      Septin

    6. XM_028836270.1 → XP_028692103.1  septin-4 isoform X5

      UniProtKB/TrEMBL
      F7HQ68
      Conserved Domains (1) summary
      pfam00735
      Location:24 → 296
      Septin

    7. XM_015119146.2 → XP_014974632.1  septin-4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QZS1, A0A8J8XB46, F6VBY7, F6VBZ5, G7NHX7
      Related
      ENSMMUP00000062588.1, ENSMMUT00000102082.1
      Conserved Domains (1) summary
      pfam00735
      Location:142 → 414
      Septin

    8. XM_028836272.1 → XP_028692105.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    9. XM_015119149.2 → XP_014974635.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    10. XM_028836274.1 → XP_028692107.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    11. XM_028836271.1 → XP_028692104.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    12. XM_028836275.1 → XP_028692108.1  septin-4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RH79
      Conserved Domains (1) summary
      pfam00735
      Location:1 → 267
      Septin

    RNA

    1. XR_001440352.2 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001266717.1: Suppressed sequence

      Description
      NM_001266717.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from chimpanzee: SEPT4 (GeneID:455160).
    Nucleotide Protein
    Heading Accession and Version

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