U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SGCA sarcoglycan alpha [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704493, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SGCAprovided by VGNC
    Official Full Name
    sarcoglycan alphaprovided by VGNC
    Primary source
    VGNC:VGNC:77191
    See related
    Ensembl:ENSMMUG00000001466
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SGCA in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (46614724..46627266, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (39377601..39388984, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene collagen type I alpha 1 chain Neighboring gene H1.9 linker histone Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene sterile alpha motif domain containing 14 Neighboring gene pyruvate dehydrogenase kinase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha-sarcoglycan
    Names
    sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      46614724..46627266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001092850.4 → XP_001092850.1  alpha-sarcoglycan isoform X1

      See identical proteins and their annotated locations for XP_001092850.1

      UniProtKB/TrEMBL
      G7NHG0
      Related
      ENSMMUP00000034893.2, ENSMMUT00000041882.3
      Conserved Domains (1) summary
      pfam05510
      Location:27 → 347
      Sarcoglycan_2; Sarcoglycan alpha/epsilon

    2. XM_015119320.2 → XP_014974806.1  alpha-sarcoglycan isoform X2

      UniProtKB/TrEMBL
      G7NHG0
      Conserved Domains (1) summary
      pfam05510
      Location:20 → 307
      Sarcoglycan_2; Sarcoglycan alpha/epsilon
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.