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    TMEM39A transmembrane protein 39A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712208, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TMEM39Aprovided by VGNC
    Official Full Name
    transmembrane protein 39Aprovided by VGNC
    Primary source
    VGNC:VGNC:79517
    See related
    Ensembl:ENSMMUG00000012010
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM39A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (156811605..156847439)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (40588273..40624070, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene protein O-glucosyltransferase 1 Neighboring gene Rho GTPase activating protein 31 Neighboring gene U6 spliceosomal RNA Neighboring gene beta-1,4-galactosyltransferase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagosome maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 39A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258076.1 → NP_001245005.1  transmembrane protein 39A

      See identical proteins and their annotated locations for NP_001245005.1

      Status: PROVISIONAL

      Source sequence(s)
      JU473018
      UniProtKB/TrEMBL
      F7H043, G7MKD9
      Related
      ENSMMUP00000015756.1, ENSMMUT00000016823.3
      Conserved Domains (1) summary
      pfam10271
      Location:42 → 477
      Tmp39; Putative transmembrane protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      156811605..156847439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843341.1 → XP_028699174.1  transmembrane protein 39A isoform X2

      UniProtKB/TrEMBL
      F7H045, G7MKD9
      Related
      ENSMMUP00000015755.3, ENSMMUT00000016822.3
      Conserved Domains (1) summary
      pfam10271
      Location:42 → 449
      Tmp39; Putative transmembrane protein

    2. XM_028843340.1 → XP_028699173.1  transmembrane protein 39A isoform X1

      UniProtKB/TrEMBL
      F7H043, G7MKD9
      Conserved Domains (1) summary
      pfam10271
      Location:42 → 477
      Tmp39; Putative transmembrane protein

    RNA

    1. XR_003726943.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.