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    KRT1 keratin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699320, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KRT1provided by VGNC
    Official Full Name
    keratin 1provided by VGNC
    Primary source
    VGNC:VGNC:74206
    Locus tag
    EGK_03685
    See related
    Ensembl:ENSMMUG00000016962
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KRT1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (52243752..52249701, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (51318639..51324275, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000867 Neighboring gene keratin 73 Neighboring gene keratin 2 Neighboring gene keratin, type II cytoskeletal 1b Neighboring gene keratin, type II cytoskeletal 2 oral-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of skin epidermis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in keratinization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    keratin, type II cytoskeletal 1
    Names
    Cytokeratin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      52243752..52249701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829507.1 → XP_028685340.1  keratin, type II cytoskeletal 1 isoform X1

      Conserved Domains (2) summary
      pfam16208
      Location:150 → 181
      Keratin_2_head; Keratin type II head
      pfam00038
      Location:185 → 497
      Filament; Intermediate filament protein

    2. XM_001098182.4 → XP_001098182.2  keratin, type II cytoskeletal 1 isoform X2

      See identical proteins and their annotated locations for XP_001098182.2

      UniProtKB/TrEMBL
      A0A8J8YEW4, F7B786, G7N728
      Related
      ENSMMUP00000022305.2, ENSMMUT00000023832.4
      Conserved Domains (4) summary
      pfam00038
      Location:185 → 497
      Filament; Intermediate filament protein
      pfam16208
      Location:150 → 181
      Keratin_2_head; Keratin type II head
      pfam16210
      Location:498 → 517
      Keratin_2_tail; Keratin type II cytoskeletal 1 tail
      cl01888
      Location:410 → 470
      DUF883; Bacterial protein of unknown function (DUF883)
    Nucleotide Protein
    Heading Accession and Version

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