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    DDX50 DExD-box helicase 50 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712511, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX50provided by VGNC
    Official Full Name
    DExD-box helicase 50provided by VGNC
    Primary source
    VGNC:VGNC:103808
    See related
    Ensembl:ENSMMUG00000001006
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX50 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (68853815..68899902, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (63514048..63561092, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene kinesin family binding protein Neighboring gene mediator of RNA polymerase II transcription subunit 28 pseudogene Neighboring gene DExD-box helicase 21 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC100429669 Neighboring gene uncharacterized protein C5orf60-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DDX50
    Names
    DEAD-box helicase 50
    NP_001245111.1
    XP_015002854.1
    XP_015002855.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258182.1 → NP_001245111.1  ATP-dependent RNA helicase DDX50

      See identical proteins and their annotated locations for NP_001245111.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477157
      UniProtKB/TrEMBL
      A0A1D5QYB8, F6SQG1
      Related
      ENSMMUP00000001350.2, ENSMMUT00000001435.4
      Conserved Domains (3) summary
      COG0513
      Location:108 → 526
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd12936
      Location:568 → 659
      GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
      cd17944
      Location:148 → 349
      DEADc_DDX21_DDX50; DEAD-box helicase domain of DEAD box proteins 21 and 50

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      68853815..68899902 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015147369.2 → XP_015002855.1  ATP-dependent RNA helicase DDX50 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QBU0, A0A1D5QYB8
      Conserved Domains (3) summary
      COG0513
      Location:43 → 461
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd12936
      Location:503 → 594
      GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
      cd17944
      Location:83 → 284
      DEADc_DDX21_DDX50; DEAD-box helicase domain of DEAD box proteins 21 and 50

    2. XM_015147368.2 → XP_015002854.1  ATP-dependent RNA helicase DDX50 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QBU0, A0A1D5QYB8
      Related
      ENSMMUP00000045509.1, ENSMMUT00000055162.2
      Conserved Domains (3) summary
      COG0513
      Location:43 → 461
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd12936
      Location:503 → 594
      GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
      cd17944
      Location:83 → 284
      DEADc_DDX21_DDX50; DEAD-box helicase domain of DEAD box proteins 21 and 50
    Nucleotide Protein
    Heading Accession and Version

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