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    LINGO2 leucine rich repeat and Ig domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706386, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LINGO2provided by VGNC
    Official Full Name
    leucine rich repeat and Ig domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:74095
    Locus tag
    EGK_07637
    See related
    Ensembl:ENSMMUG00000017199
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LINGO2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (54552649..55826458)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (54634966..55908719)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene NAD-dependent malic enzyme, mitochondrial pseudogene Neighboring gene uncharacterized LOC114672774 Neighboring gene U4 spliceosomal RNA Neighboring gene microRNA mir-873 Neighboring gene microRNA mir-876 Neighboring gene uncharacterized LOC114672775 Neighboring gene melanoma inhibitory activity protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
    Names
    Leucine-rich repeat neuronal protein 6C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      54552649..55826458
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835116.1 → XP_028690949.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    2. XM_015117576.2 → XP_014973062.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    3. XM_015117575.2 → XP_014973061.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    4. XM_001104190.4 → XP_001104190.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      See identical proteins and their annotated locations for XP_001104190.1

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    5. XM_028835118.1 → XP_028690951.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    6. XM_028835117.1 → XP_028690950.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    7. XM_028835115.1 → XP_028690948.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    8. XM_015117577.2 → XP_014973063.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      UniProtKB/TrEMBL
      A0A8J8Y1P2, F7HGM2, G7NFP5
      Related
      ENSMMUP00000022625.2, ENSMMUT00000024180.4
      Conserved Domains (7) summary
      smart00013
      Location:27 → 60
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:355 → 408
      LRRCT; Leucine rich repeat C-terminal domain
      sd00033
      Location:83 → 106
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:106 → 165
      LRR_8; Leucine rich repeat
      cd00096
      Location:417 → 421
      Ig; Ig strand A' [structural motif]
      cd21340
      Location:200 → 373
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl11960
      Location:411 → 500
      Ig; Immunoglobulin domain

    RNA

    1. XR_003723236.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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