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    SNX2 sorting nexin 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700507, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNX2provided by VGNC
    Official Full Name
    sorting nexin 2provided by VGNC
    Primary source
    VGNC:VGNC:77682
    See related
    Ensembl:ENSMMUG00000023598
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See SNX2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (120276713..120337676)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (120156002..120209293)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene synuclein alpha interacting protein Neighboring gene uncharacterized LOC114678887 Neighboring gene arginine-fifty homeobox-like Neighboring gene small nucleolar RNA U13 Neighboring gene sorting nexin 24 Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial pseudogene Neighboring gene peptidylprolyl isomerase C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in early endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of retromer complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260897.1 → NP_001247826.1  sorting nexin-2

      See identical proteins and their annotated locations for NP_001247826.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043696
      UniProtKB/TrEMBL
      A0A5F8AK91, G7MTV0
      Related
      ENSMMUP00000078261.1, ENSMMUT00000098617.1
      Conserved Domains (3) summary
      cd07282
      Location:142 → 265
      PX_SNX2; The phosphoinositide binding Phox Homology domain of Sorting Nexin 2
      cd07664
      Location:283 → 516
      BAR_SNX2; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2
      pfam03700
      Location:3 → 75
      Sorting_nexin; Sorting nexin, N-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      120276713..120337676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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