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    IST1 IST1 factor associated with ESCRT-III [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707245, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IST1provided by VGNC
    Official Full Name
    IST1 factor associated with ESCRT-IIIprovided by VGNC
    Primary source
    VGNC:VGNC:73675
    Locus tag
    EGK_12962
    See related
    Ensembl:ENSMMUG00000009688
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    KIAA0174
    Orthologs
    human mouse all
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    Genomic context

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    See IST1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (59589347..59623912, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (56843957..56878515, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 25-like Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting Neighboring gene zinc finger protein 821 Neighboring gene ataxin 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    IST1 homolog
    Names
    IST1, ESCRT-III associated factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      59589347..59623912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126600.2 → XP_014982086.1  IST1 homolog isoform X1

      UniProtKB/TrEMBL
      A0A5S6RDF2, A0A8J8XAH8, F6RWU3, F6RWV1, F6YAS0, G7NQN8
      Related
      ENSMMUP00000032334.3, ENSMMUT00000039248.3
      Conserved Domains (1) summary
      pfam03398
      Location:13 → 176
      Ist1; Regulator of Vps4 activity in the MVB pathway

    2. XM_015126603.2 → XP_014982089.1  IST1 homolog isoform X4

      Conserved Domains (1) summary
      pfam03398
      Location:13 → 176
      Ist1; Regulator of Vps4 activity in the MVB pathway

    3. XM_015126602.2 → XP_014982088.1  IST1 homolog isoform X3

      Conserved Domains (1) summary
      pfam03398
      Location:13 → 176
      Ist1; Regulator of Vps4 activity in the MVB pathway

    4. XM_015126601.2 → XP_014982087.1  IST1 homolog isoform X2

      Conserved Domains (1) summary
      pfam03398
      Location:13 → 176
      Ist1; Regulator of Vps4 activity in the MVB pathway

    5. XM_028840716.1 → XP_028696549.1  IST1 homolog isoform X5

      Conserved Domains (1) summary
      pfam03398
      Location:1 → 28
      Ist1; Regulator of Vps4 activity in the MVB pathway
    Nucleotide Protein
    Heading Accession and Version

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