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    BOC BOC cell adhesion associated, oncogene regulated [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709028, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BOCprovided by VGNC
    Official Full Name
    BOC cell adhesion associated, oncogene regulatedprovided by VGNC
    Primary source
    VGNC:VGNC:70332
    See related
    Ensembl:ENSMMUG00000013443
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BOC in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (162952841..163029266, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (34256572..34332943)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 44 Neighboring gene PHD finger-like domain-containing protein 5A pseudogene Neighboring gene hsc70-interacting protein pseudogene Neighboring gene uncharacterized LOC106996779 Neighboring gene nucleolus and neural progenitor protein Neighboring gene GTP binding protein 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brother of CDO
    Names
    Boc homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      162952841..163029266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844626.1 → XP_028700459.1  brother of CDO isoform X5

      UniProtKB/TrEMBL
      A0A1D5R726
      Conserved Domains (6) summary
      smart00408
      Location:66 → 127
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:428 → 519
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:230 → 294
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:307 → 381
      fn3; Fibronectin type III domain
      pfam07679
      Location:144 → 227
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:1 → 25
      Ig; Immunoglobulin domain

    2. XM_028844625.1 → XP_028700458.1  brother of CDO isoform X4

      UniProtKB/TrEMBL
      A0A1D5R726
      Related
      ENSMMUP00000056114.2, ENSMMUT00000071323.2
      Conserved Domains (6) summary
      smart00408
      Location:197 → 258
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:559 → 650
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:361 → 425
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:438 → 512
      fn3; Fibronectin type III domain
      pfam07679
      Location:275 → 358
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain

    3. XM_028844623.1 → XP_028700456.1  brother of CDO isoform X2

      UniProtKB/TrEMBL
      F6YNM0, I2CXV2
      Related
      ENSMMUP00000017668.4, ENSMMUT00000018867.4
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:606 → 697
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 559
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    4. XM_028844624.1 → XP_028700457.1  brother of CDO isoform X3

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    5. XM_015129874.2 → XP_014985360.2  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    6. XM_015129873.2 → XP_014985359.2  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    7. XM_015129877.2 → XP_014985363.2  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    8. XM_028844621.1 → XP_028700454.1  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    9. XM_015129876.2 → XP_014985362.2  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain

    10. XM_028844622.1 → XP_028700455.1  brother of CDO isoform X1

      UniProtKB/TrEMBL
      I2CXV2
      Conserved Domains (7) summary
      smart00408
      Location:245 → 306
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:607 → 698
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16625
      Location:409 → 473
      ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
      pfam00041
      Location:486 → 560
      fn3; Fibronectin type III domain
      pfam07679
      Location:323 → 406
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:36 → 109
      Ig_3; Immunoglobulin domain
      cl11960
      Location:143 → 204
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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