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    DCC DCC netrin 1 receptor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693352, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DCCprovided by VGNC
    Official Full Name
    DCC netrin 1 receptorprovided by VGNC
    Primary source
    VGNC:VGNC:71746
    See related
    Ensembl:ENSMMUG00000013999
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DCC in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (28833053..30051626, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (42203632..42687252)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA30/SNORA37 family Neighboring gene methyl-CpG binding domain protein 2 Neighboring gene uncharacterized LOC106994520 Neighboring gene uncharacterized LOC106994519 Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene vomeronasal 1 receptor macMulV1R-ps1033 pseudogene Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene probable ribosome biogenesis protein RLP24 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    netrin receptor DCC
    Names
    deleted in colorectal carcinoma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      28833053..30051626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028837903.1 → XP_028693736.1  netrin receptor DCC isoform X5

      UniProtKB/TrEMBL
      H9F8D0
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1128 → 1425
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    2. XM_028837902.1 → XP_028693735.1  netrin receptor DCC isoform X4

      UniProtKB/TrEMBL
      H9F8D0
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1442
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    3. XM_028837901.1 → XP_028693734.1  netrin receptor DCC isoform X3

      UniProtKB/TrEMBL
      H9F8D0
      Related
      ENSMMUP00000080480.1, ENSMMUT00000105108.1
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1443
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    4. XM_028837900.1 → XP_028693733.1  netrin receptor DCC isoform X2

      UniProtKB/TrEMBL
      H9F8D0
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1444
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    5. XM_028837899.1 → XP_028693732.1  netrin receptor DCC isoform X1

      UniProtKB/TrEMBL
      F6RRI0, H9F8D0
      Related
      ENSMMUP00000049619.2, ENSMMUT00000075934.2
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1445
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    6. XM_015121997.2 → XP_014977483.2  netrin receptor DCC isoform X1

      UniProtKB/TrEMBL
      F6RRI0, H9F8D0
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1445
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    7. XM_028837898.1 → XP_028693731.1  netrin receptor DCC isoform X1

      UniProtKB/TrEMBL
      F6RRI0, H9F8D0
      Related
      ENSMMUP00000018397.4, ENSMMUT00000019648.4
      Conserved Domains (7) summary
      cd05722
      Location:41 → 136
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:153 → 219
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:726 → 805
      FN3; Fibronectin type 3 domain
      cd00063
      Location:528 → 617
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1148 → 1445
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:241 → 327
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:347 → 417
      Ig; Immunoglobulin domain

    RNA

    1. XR_003724527.1 RNA Sequence

    2. XR_003724526.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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