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    LRRC4B leucine rich repeat containing 4B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719338, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC4Bprovided by VGNC
    Official Full Name
    leucine rich repeat containing 4Bprovided by VGNC
    Primary source
    VGNC:VGNC:74350
    See related
    Ensembl:ENSMMUG00000021059
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC4B in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (50423865..50478666, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (45882608..45940807, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene Josephin domain containing 2 Neighboring gene aspartate dehydrogenase domain containing Neighboring gene synaptotagmin 3 Neighboring gene chromosome 19 C19orf81 homolog Neighboring gene SH3 and multiple ankyrin repeat domains 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 4B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266779.1 → NP_001253708.1  leucine-rich repeat-containing protein 4B precursor

      See identical proteins and their annotated locations for NP_001253708.1

      Status: PROVISIONAL

      Source sequence(s)
      JV667506
      UniProtKB/TrEMBL
      F7H0A3, I2CYY4
      Related
      ENSMMUP00000027716.4, ENSMMUT00000029616.4
      Conserved Domains (5) summary
      smart00013
      Location:57 → 90
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:311 → 361
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:76 → 297
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:88 → 111
      LRR_RI; leucine-rich repeat [structural motif]
      pfam07679
      Location:364 → 453
      I-set; Immunoglobulin I-set domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      50423865..50478666 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838522.1 → XP_028694355.1  leucine-rich repeat-containing protein 4B isoform X1

      UniProtKB/TrEMBL
      F7H0A3, I2CYY4
      Related
      ENSMMUP00000065777.1, ENSMMUT00000096763.1
      Conserved Domains (5) summary
      smart00013
      Location:57 → 90
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:311 → 361
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:76 → 297
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:88 → 111
      LRR_RI; leucine-rich repeat [structural motif]
      pfam07679
      Location:364 → 453
      I-set; Immunoglobulin I-set domain
    Nucleotide Protein
    Heading Accession and Version

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