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    RRP8 ribosomal RNA processing 8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712011, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RRP8provided by VGNC
    Official Full Name
    ribosomal RNA processing 8provided by VGNC
    Primary source
    VGNC:VGNC:77120
    Locus tag
    EGK_06532
    See related
    Ensembl:ENSMMUG00000007738
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RRP8 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (59336507..59342637)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (60176784..60180527)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene tripeptidyl peptidase 1 Neighboring gene TATA-box binding protein associated factor 10 Neighboring gene integrin linked kinase Neighboring gene dynein heavy chain domain 1 Neighboring gene uncharacterized LOC114672346 Neighboring gene voltage-dependent anion-selective channel protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to glucose starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rDNA heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by glucose IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin silencing complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of rDNA heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal RNA-processing protein 8
    Names
    Ribosomal RNA-processing protein 8
    ribosomal RNA processing 8, methyltransferase, homolog
    XP_014970445.1
    XP_028689586.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      59336507..59342637
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114959.2 → XP_014970445.1  ribosomal RNA-processing protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XMA3, F7C3H4, G7NE07
      Related
      ENSMMUP00000010168.2, ENSMMUT00000010839.4
      Conserved Domains (2) summary
      COG0500
      Location:299 → 419
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
      pfam05148
      Location:242 → 456
      Methyltransf_8; Hypothetical methyltransferase

    2. XM_028833753.1 → XP_028689586.1  ribosomal RNA-processing protein 8 isoform X1

      Conserved Domains (1) summary
      cl17173
      Location:242 → 427
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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