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    LOXL1 lysyl oxidase like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706464, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LOXL1provided by VGNC
    Official Full Name
    lysyl oxidase like 1provided by VGNC
    Primary source
    VGNC:VGNC:82176
    See related
    Ensembl:ENSMMUG00000003638
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LOXL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (50752136..50778234)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (49919940..49948650, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene inhibitory synaptic factor 1 Neighboring gene TBC1 domain family member 21 Neighboring gene uncharacterized LOC106999235 Neighboring gene stomatin like 1 Neighboring gene PML nuclear body scaffold

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Decreased copper concentrations but increased lysyl oxidase activity in ischemic hearts of rhesus monkeys. Xiao Y, et al. Metallomics, 2016 Sep 1. PMID 27210292
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. high lysyl oxidase activity is associated with ischemic hearts.
      Title: Decreased copper concentrations but increased lysyl oxidase activity in ischemic hearts of rhesus monkeys.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-lysine 6-oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysyl oxidase homolog 1
    Names
    lysyl oxidase homolog 1 preproprotein
    XP_014998161.1
    XP_028706940.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      50752136..50778234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142675.2 → XP_014998161.1  lysyl oxidase homolog 1 isoform X1

      UniProtKB/TrEMBL
      F6Q5T0
      Related
      ENSMMUP00000004855.4, ENSMMUT00000005153.4
      Conserved Domains (1) summary
      pfam01186
      Location:372 → 566
      Lysyl_oxidase; Lysyl oxidase

    2. XM_028851107.1 → XP_028706940.1  lysyl oxidase homolog 1 isoform X2

      UniProtKB/TrEMBL
      H9F729
      Conserved Domains (1) summary
      pfam01186
      Location:30 → 230
      Lysyl_oxidase; Lysyl oxidase
    Nucleotide Protein
    Heading Accession and Version

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