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    DENND4C DENN domain containing 4C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712447, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DENND4Cprovided by VGNC
    Official Full Name
    DENN domain containing 4Cprovided by VGNC
    Primary source
    VGNC:VGNC:71715
    See related
    Ensembl:ENSMMUG00000004338
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DENND4C in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (64269031..64417101, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (64620316..64774821, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene alkaline ceramidase 2 Neighboring gene 40S ribosomal protein S6 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 pseudogene Neighboring gene translation initiation factor IF-2-like Neighboring gene 40S ribosomal protein S6-like Neighboring gene perilipin-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DENN domain-containing protein 4C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      64269031..64417101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117629.2 → XP_014973115.2  DENN domain-containing protein 4C isoform X1

      UniProtKB/TrEMBL
      A0A5F8AI23, F7HT26
      Conserved Domains (4) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:192 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:820 → 849
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:310 → 492
      DENN; DENN (AEX-3) domain

    2. XM_015117632.2 → XP_014973118.2  DENN domain-containing protein 4C isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZSB4, F6XME1
      Related
      ENSMMUP00000005805.4, ENSMMUT00000006166.4
      Conserved Domains (4) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:192 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:820 → 849
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:310 → 492
      DENN; DENN (AEX-3) domain

    3. XM_015117633.2 → XP_014973119.2  DENN domain-containing protein 4C isoform X4

      UniProtKB/TrEMBL
      A0A5F8AI23, A0A5F8AI81
      Related
      ENSMMUP00000076678.1, ENSMMUT00000108304.1
      Conserved Domains (4) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:192 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:752 → 780
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:310 → 492
      DENN; DENN (AEX-3) domain

    4. XM_015117630.2 → XP_014973116.2  DENN domain-containing protein 4C isoform X1

      UniProtKB/TrEMBL
      A0A5F8AI23, F7HT26
      Related
      ENSMMUP00000039281.3, ENSMMUT00000046240.3
      Conserved Domains (4) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:192 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:820 → 849
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:310 → 492
      DENN; DENN (AEX-3) domain

    5. XM_028835135.1 → XP_028690968.1  DENN domain-containing protein 4C isoform X5

      UniProtKB/TrEMBL
      G7NFY0
      Conserved Domains (4) summary
      smart00801
      Location:374 → 447
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:7 → 91
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:635 → 664
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:125 → 307
      DENN; DENN (AEX-3) domain

    6. XM_028835136.1 → XP_028690969.1  DENN domain-containing protein 4C isoform X6

      UniProtKB/TrEMBL
      G7NFY0
      Conserved Domains (4) summary
      smart00801
      Location:323 → 396
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:584 → 613
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:74 → 256
      DENN; DENN (AEX-3) domain
      cl04085
      Location:1 → 40
      uDENN; uDENN domain

    7. XM_015117634.2 → XP_014973120.2  DENN domain-containing protein 4C isoform X7

      UniProtKB/TrEMBL
      G7NFY0
      Conserved Domains (3) summary
      smart00801
      Location:207 → 280
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:468 → 497
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:1 → 140
      DENN; DENN (AEX-3) domain

    8. XM_028835134.1 → XP_028690967.1  DENN domain-containing protein 4C isoform X2

      UniProtKB/TrEMBL
      A0A5F8AI23
      Conserved Domains (4) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:192 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:820 → 849
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:310 → 492
      DENN; DENN (AEX-3) domain
    Nucleotide Protein
    Heading Accession and Version

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