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    XCR1 X-C motif chemokine receptor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713622, updated on 17-Aug-2024

    Summary

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    Official Symbol
    XCR1provided by VGNC
    Official Full Name
    X-C motif chemokine receptor 1provided by VGNC
    Primary source
    VGNC:VGNC:79016
    See related
    Ensembl:ENSMMUG00000023584
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See XCR1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (102027583..102036519, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (96527564..96536439)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine receptor 9 Neighboring gene FYVE and coiled-coil domain autophagy adaptor 1 Neighboring gene C-X-C motif chemokine receptor 6 Neighboring gene nuclear receptor-binding factor 2 pseudogene Neighboring gene vascular endothelial growth factor receptor 1 pseudogene Neighboring gene C-C motif chemokine receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Cloning and in vitro expression of XCR1 of Rhesus macaque]. Yu L, et al. Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi, 2017 Apr. PMID 28395709
    2. TLR3-responsive, XCR1+, CD141(BDCA-3)+/CD8α+-equivalent dendritic cells uncovered in healthy and simian immunodeficiency virus-infected rhesus macaques. Dutertre CA, et al. J Immunol, 2014 May 15. PMID 24740505
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The complete cDNA sequence of XCR1 was obtained, containing 415 bp 5'UTR, 1003 bp coding region and 248 bp 3'UTR.
      Title: [Cloning and in vitro expression of XCR1 of Rhesus macaque].
    2. TLR3-responsive, XCR1+, CD141(BDCA-3)+/CD8alpha+-equivalent dendritic cells uncovered in healthy and simian immunodeficiency virus-infected rhesus macaques.
      Title: TLR3-responsive, XCR1+, CD141(BDCA-3)+/CD8α+-equivalent dendritic cells uncovered in healthy and simian immunodeficiency virus-infected rhesus macaques.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chemokine XC receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      102027583..102036519 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001114298.3 → XP_001114298.2  chemokine XC receptor 1

      UniProtKB/TrEMBL
      A0A5S6R849, A0A8J8XRR0, F7HFU0, G7MIU2
      Related
      ENSMMUP00000031047.3, ENSMMUT00000033177.4
      Conserved Domains (1) summary
      cd15182
      Location:32 → 298
      7tmA_XCR1; XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_001114260.3 → XP_001114260.2  chemokine XC receptor 1

      UniProtKB/TrEMBL
      A0A5S6R849, A0A8J8XRR0, F7HFU0, G7MIU2
      Conserved Domains (1) summary
      cd15182
      Location:32 → 298
      7tmA_XCR1; XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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