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    TLCD3A TLC domain containing 3A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699707, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TLCD3Aprovided by VGNC
    Official Full Name
    TLC domain containing 3Aprovided by VGNC
    Primary source
    VGNC:VGNC:72406
    See related
    Ensembl:ENSMMUG00000055344
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM57A
    Orthologs
    human mouse all
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    Genomic context

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    See TLCD3A in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (597042..607267)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (590315..600308)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene VPS53 subunit of GARP complex Neighboring gene uncharacterized LOC114673029 Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene diazepam-binding inhibitor-like 5 Neighboring gene gem nuclear organelle associated protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM57A
    Names
    family with sequence similarity 57 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      597042..607267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835839.1 → XP_028691672.1  protein FAM57A isoform X2

    2. XM_028835838.1 → XP_028691671.1  protein FAM57A isoform X1

      UniProtKB/TrEMBL
      A0A5F8AER1
      Related
      ENSMMUP00000076373.1, ENSMMUT00000103254.1
      Conserved Domains (1) summary
      smart00724
      Location:33 → 249
      TLC; TRAM, LAG1 and CLN8 homology domains
    Nucleotide Protein
    Heading Accession and Version

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