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    RUNX1T1 RUNX1 partner transcriptional co-repressor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696934, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RUNX1T1provided by VGNC
    Official Full Name
    RUNX1 partner transcriptional co-repressor 1provided by VGNC
    Primary source
    VGNC:VGNC:80259
    Locus tag
    EGK_19116
    See related
    Ensembl:ENSMMUG00000023115
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RUNX1T1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (92327107..92475643, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (90534955..90683740, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999853 Neighboring gene 28S ribosomal protein S16, mitochondrial pseudogene Neighboring gene uncharacterized LOC114680425 Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein CBFA2T1
    Names
    Protein MTG8
    RUNX1 translocation partner 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      92327107..92475643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852770.1 → XP_028708603.1  protein CBFA2T1 isoform X1

      UniProtKB/TrEMBL
      F7F7J0
      Related
      ENSMMUP00000009560.3, ENSMMUT00000010190.4
      Conserved Domains (4) summary
      pfam04094
      Location:478 → 615
      DUF390; Protein of unknown function (DUF390)
      pfam08788
      Location:348 → 414
      NHR2; NHR2 domain like
      pfam01753
      Location:526 → 562
      zf-MYND; MYND finger
      pfam07531
      Location:133 → 219
      TAFH; NHR1 homology to TAF

    2. XM_015145689.2 → XP_015001175.1  protein CBFA2T1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QY91
      Related
      ENSMMUP00000053022.2, ENSMMUT00000077797.2
      Conserved Domains (4) summary
      COG1390
      Location:406 → 477
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:300 → 366
      NHR2; NHR2 domain like
      pfam01753
      Location:478 → 514
      zf-MYND; MYND finger
      pfam07531
      Location:85 → 173
      TAFH; NHR1 homology to TAF

    3. XM_015145683.2 → XP_015001169.1  protein CBFA2T1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RH10, A0A8J8XVW4, F7DLI9, G7MZR5
      Related
      ENSMMUP00000059604.1, ENSMMUT00000076508.2
      Conserved Domains (4) summary
      COG1390
      Location:443 → 514
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:337 → 403
      NHR2; NHR2 domain like
      pfam01753
      Location:515 → 551
      zf-MYND; MYND finger
      pfam07531
      Location:122 → 210
      TAFH; NHR1 homology to TAF

    4. XM_028852771.1 → XP_028708604.1  protein CBFA2T1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RH10, A0A8J8XVW4, F7DLI9, G7MZR5
      Conserved Domains (4) summary
      COG1390
      Location:443 → 514
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:337 → 403
      NHR2; NHR2 domain like
      pfam01753
      Location:515 → 551
      zf-MYND; MYND finger
      pfam07531
      Location:122 → 210
      TAFH; NHR1 homology to TAF

    5. XM_015145684.2 → XP_015001170.1  protein CBFA2T1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RH10, A0A8J8XVW4, F7DLI9, G7MZR5
      Conserved Domains (4) summary
      COG1390
      Location:443 → 514
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:337 → 403
      NHR2; NHR2 domain like
      pfam01753
      Location:515 → 551
      zf-MYND; MYND finger
      pfam07531
      Location:122 → 210
      TAFH; NHR1 homology to TAF

    6. XM_015145688.2 → XP_015001174.1  protein CBFA2T1 isoform X4

      UniProtKB/TrEMBL
      F6Q6G9
      Related
      ENSMMUP00000032054.2, ENSMMUT00000038963.3
      Conserved Domains (4) summary
      COG1390
      Location:416 → 487
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:310 → 376
      NHR2; NHR2 domain like
      pfam01753
      Location:488 → 524
      zf-MYND; MYND finger
      pfam07531
      Location:95 → 183
      TAFH; NHR1 homology to TAF

    7. XM_028852772.1 → XP_028708605.1  protein CBFA2T1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QY91
      Conserved Domains (4) summary
      COG1390
      Location:406 → 477
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:300 → 366
      NHR2; NHR2 domain like
      pfam01753
      Location:478 → 514
      zf-MYND; MYND finger
      pfam07531
      Location:85 → 173
      TAFH; NHR1 homology to TAF

    8. XM_015145687.2 → XP_015001173.1  protein CBFA2T1 isoform X3

      UniProtKB/TrEMBL
      F7DLI2
      Related
      ENSMMUP00000030429.3, ENSMMUT00000032520.3
      Conserved Domains (4) summary
      COG1390
      Location:423 → 494
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:317 → 383
      NHR2; NHR2 domain like
      pfam01753
      Location:495 → 531
      zf-MYND; MYND finger
      pfam07531
      Location:102 → 190
      TAFH; NHR1 homology to TAF

    9. XM_015145685.2 → XP_015001171.1  protein CBFA2T1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RH10, A0A8J8XVW4, F7DLI9, G7MZR5
      Related
      ENSMMUP00000030428.3, ENSMMUT00000032519.3
      Conserved Domains (4) summary
      COG1390
      Location:443 → 514
      NtpE; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]
      pfam08788
      Location:337 → 403
      NHR2; NHR2 domain like
      pfam01753
      Location:515 → 551
      zf-MYND; MYND finger
      pfam07531
      Location:122 → 210
      TAFH; NHR1 homology to TAF
    Nucleotide Protein
    Heading Accession and Version

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