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    ASXL1 ASXL transcriptional regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711799, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ASXL1provided by VGNC
    Official Full Name
    ASXL transcriptional regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:70095
    See related
    Ensembl:ENSMMUG00000007117
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ASXL1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (67596269..67670914)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (31650161..31726937, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670465 Neighboring gene protein O-fucosyltransferase 1 Neighboring gene kinesin family member 3B Neighboring gene nucleolar protein 4 like Neighboring gene uncharacterized LOC107000437 Neighboring gene uncharacterized LOC114670466

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxisome proliferator activated receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PR-DUB complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative Polycomb group protein ASXL1
    Names
    additional sex combs like 1, transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      67596269..67670914
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149252.2 → XP_015004738.2  putative Polycomb group protein ASXL1 isoform X1

      UniProtKB/TrEMBL
      G7N537
      Conserved Domains (3) summary
      pfam05066
      Location:54 → 116
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1539 → 1572
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:269 → 392
      ASXH; Asx homology domain

    2. XM_015149253.2 → XP_015004739.2  putative Polycomb group protein ASXL1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q495, A0A1D5R059, H9Z5X6
      Related
      ENSMMUP00000042859.2, ENSMMUT00000075088.2
      Conserved Domains (3) summary
      pfam05066
      Location:11 → 83
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1506 → 1539
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:236 → 359
      ASXH; Asx homology domain

    3. XM_015149254.2 → XP_015004740.2  putative Polycomb group protein ASXL1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5R059
      Related
      ENSMMUP00000053692.2, ENSMMUT00000056929.2
      Conserved Domains (3) summary
      pfam05066
      Location:11 → 82
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1505 → 1538
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:235 → 358
      ASXH; Asx homology domain

    4. XM_015149263.2 → XP_015004749.1  putative Polycomb group protein ASXL1 isoform X5

      Conserved Domains (1) summary
      pfam05066
      Location:11 → 83
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain

    5. XM_015149258.2 → XP_015004744.2  putative Polycomb group protein ASXL1 isoform X4

      UniProtKB/TrEMBL
      G7N537
      Conserved Domains (3) summary
      pfam05066
      Location:1 → 55
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1478 → 1511
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:208 → 331
      ASXH; Asx homology domain

    6. XM_015149259.2 → XP_015004745.2  putative Polycomb group protein ASXL1 isoform X4

      UniProtKB/TrEMBL
      G7N537
      Conserved Domains (3) summary
      pfam05066
      Location:1 → 55
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1478 → 1511
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:208 → 331
      ASXH; Asx homology domain

    7. XM_028828302.1 → XP_028684135.1  putative Polycomb group protein ASXL1 isoform X4

      UniProtKB/TrEMBL
      G7N537
      Related
      ENSMMUP00000009322.4, ENSMMUT00000009931.4
      Conserved Domains (3) summary
      pfam05066
      Location:1 → 55
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13922
      Location:1478 → 1511
      PHD_3; PHD domain of transcriptional enhancer, Asx
      pfam13919
      Location:208 → 331
      ASXH; Asx homology domain
    Nucleotide Protein
    Heading Accession and Version

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