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    ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708058, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ATP2A1
    Gene description
    ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
    Locus tag
    EGK_12636
    See related
    Ensembl:ENSMMUG00000023526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATP2A1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (26828063..26857497, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (27286331..27315870, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T cells 2 interacting protein Neighboring gene CD19 molecule Neighboring gene rabaptin, RAB GTPase binding effector protein 2 Neighboring gene SH2B adaptor protein 1 Neighboring gene Tu translation elongation factor, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type calcium transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcoplasmic/endoplasmic reticulum calcium ATPase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      26828063..26857497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125855.2 → XP_014981341.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RJU0, I2CX33
      Related
      ENSMMUP00000068171.1, ENSMMUT00000092021.1
      Conserved Domains (6) summary
      TIGR01116
      Location:53 → 989
      ATPase-IIA1_Ca; sarco/endoplasmic reticulum calcium-translocating P-type ATPase
      pfam00122
      Location:93 → 340
      E1-E2_ATPase; E1-E2 ATPase
      pfam00689
      Location:784 → 987
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
      pfam00690
      Location:4 → 72
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam12710
      Location:604 → 712
      HAD; haloacid dehalogenase-like hydrolase
      pfam13246
      Location:419 → 528
      Cation_ATPase; Cation transport ATPase (P-type)

    2. XM_015125854.2 → XP_014981340.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RJU0, G7NQG5
      Related
      ENSMMUP00000060584.2, ENSMMUT00000077384.2
      Conserved Domains (6) summary
      TIGR01116
      Location:53 → 989
      ATPase-IIA1_Ca; sarco/endoplasmic reticulum calcium-translocating P-type ATPase
      pfam00122
      Location:93 → 340
      E1-E2_ATPase; E1-E2 ATPase
      pfam00689
      Location:784 → 987
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
      pfam00690
      Location:4 → 72
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam12710
      Location:604 → 712
      HAD; haloacid dehalogenase-like hydrolase
      pfam13246
      Location:419 → 528
      Cation_ATPase; Cation transport ATPase (P-type)
    Nucleotide Protein
    Heading Accession and Version

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