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    CCNY cyclin Y [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698889, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCNYprovided by VGNC
    Official Full Name
    cyclin Yprovided by VGNC
    Primary source
    VGNC:VGNC:70840
    See related
    Ensembl:ENSMMUG00000006713
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CCNY in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (36212134..36526287)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (35488355..35803570)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene V-type proton ATPase subunit G 1 pseudogene Neighboring gene cAMP responsive element modulator Neighboring gene uncharacterized LOC107000097 Neighboring gene U6 spliceosomal RNA Neighboring gene gap junction protein delta 4 Neighboring gene frizzled class receptor 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytoplasmic cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-Y

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257490.1 → NP_001244419.1  cyclin-Y

      See identical proteins and their annotated locations for NP_001244419.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320146
      UniProtKB/TrEMBL
      F7HHK7, F7HHL0, I0FLH7
      Related
      ENSMMUP00000008832.4, ENSMMUT00000009399.4
      Conserved Domains (1) summary
      cd20540
      Location:166 → 262
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      36212134..36526287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146745.2 → XP_015002231.1  cyclin-Y isoform X3

      UniProtKB/TrEMBL
      G7N1U8
      Conserved Domains (1) summary
      cd20540
      Location:112 → 208
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    2. XM_015146744.2 → XP_015002230.1  cyclin-Y isoform X3

      UniProtKB/TrEMBL
      G7N1U8
      Conserved Domains (1) summary
      cd20540
      Location:112 → 208
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    3. XM_015146741.2 → XP_015002227.1  cyclin-Y isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q0N1, G7N1U8
      Related
      ENSMMUP00000041593.2, ENSMMUT00000072307.2
      Conserved Domains (1) summary
      cd20540
      Location:126 → 222
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    4. XM_015146746.2 → XP_015002232.1  cyclin-Y isoform X4

      UniProtKB/TrEMBL
      F7HHK7
      Conserved Domains (1) summary
      cd20540
      Location:179 → 275
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    5. XM_015146743.2 → XP_015002229.1  cyclin-Y isoform X2

      UniProtKB/TrEMBL
      G7N1U8
      Related
      ENSMMUP00000049153.2, ENSMMUT00000074352.2
      Conserved Domains (1) summary
      cd20540
      Location:117 → 213
      CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

    6. XM_028853329.1 → XP_028709162.1  cyclin-Y isoform X5

      Related
      ENSMMUP00000067508.1, ENSMMUT00000096151.1
      Conserved Domains (1) summary
      pfam00134
      Location:28 → 150
      Cyclin_N; Cyclin, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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