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    ZNFX1 zinc finger NFX1-type containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703746, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNFX1provided by VGNC
    Official Full Name
    zinc finger NFX1-type containing 1provided by VGNC
    Primary source
    VGNC:VGNC:79794
    See related
    Ensembl:ENSMMUG00000023623
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNFX1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (84462507..84495626, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (15142631..15175934)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene staufen double-stranded RNA binding protein 1 Neighboring gene DEAD-box helicase 27 Neighboring gene uncharacterized LOC107000371 Neighboring gene small nucleolar SNORD12/SNORD106 Neighboring gene small nucleolar SNORD12/SNORD106

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulatory ncRNA-mediated heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear RNA-directed RNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NFX1-type zinc finger-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      84462507..84495626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148795.2 → XP_015004281.2  NFX1-type zinc finger-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A4C2, H9ZBJ1
      Related
      ENSMMUP00000072788.1, ENSMMUT00000108425.1
      Conserved Domains (6) summary
      cd06008
      Location:1417 → 1461
      NF-X1-zinc-finger; Presumably a zinc binding domain, which has been shown to bind to DNA in the human nuclear transcriptional repressor NF-X1. The zinc finger can be characterized by the pattern C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1 zinc finger ...
      pfam15042
      Location:1440 → 1518
      LELP1; Late cornified envelope-like proline-rich protein 1
      pfam13086
      Location:859 → 994
      AAA_11; AAA domain
      cd18808
      Location:1031 → 1207
      SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
      cd17936
      Location:934 → 1029
      EEXXEc_NFX1; EEXXE-box helicase domain of NFX1
      cl28899
      Location:598 → 624
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    2. XM_015148792.2 → XP_015004278.2  NFX1-type zinc finger-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZVT3, A0A8J8XI29, G7N4K7, H9ZBJ1
      Related
      ENSMMUP00000069278.1, ENSMMUT00000110345.1
      Conserved Domains (7) summary
      cd06008
      Location:1461 → 1505
      NF-X1-zinc-finger; Presumably a zinc binding domain, which has been shown to bind to DNA in the human nuclear transcriptional repressor NF-X1. The zinc finger can be characterized by the pattern C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1 zinc finger ...
      COG1199
      Location:596 → 773
      DinG; Rad3-related DNA helicase [Replication, recombination and repair]
      TIGR01448
      Location:518 → 647
      recD_rel; helicase, putative, RecD/TraA family
      pfam15042
      Location:1484 → 1562
      LELP1; Late cornified envelope-like proline-rich protein 1
      pfam13086
      Location:903 → 1038
      AAA_11; AAA domain
      cd18808
      Location:1075 → 1251
      SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
      cd17936
      Location:978 → 1073
      EEXXEc_NFX1; EEXXE-box helicase domain of NFX1

    3. XM_015148794.2 → XP_015004280.2  NFX1-type zinc finger-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZVT3, A0A8J8XI29, G7N4K7, H9ZBJ1
      Conserved Domains (7) summary
      cd06008
      Location:1461 → 1505
      NF-X1-zinc-finger; Presumably a zinc binding domain, which has been shown to bind to DNA in the human nuclear transcriptional repressor NF-X1. The zinc finger can be characterized by the pattern C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1 zinc finger ...
      COG1199
      Location:596 → 773
      DinG; Rad3-related DNA helicase [Replication, recombination and repair]
      TIGR01448
      Location:518 → 647
      recD_rel; helicase, putative, RecD/TraA family
      pfam15042
      Location:1484 → 1562
      LELP1; Late cornified envelope-like proline-rich protein 1
      pfam13086
      Location:903 → 1038
      AAA_11; AAA domain
      cd18808
      Location:1075 → 1251
      SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
      cd17936
      Location:978 → 1073
      EEXXEc_NFX1; EEXXE-box helicase domain of NFX1

    4. XM_015148793.2 → XP_015004279.2  NFX1-type zinc finger-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZVT3, A0A8J8XI29, G7N4K7, H9ZBJ1
      Related
      ENSMMUP00000075842.1, ENSMMUT00000087190.1
      Conserved Domains (7) summary
      cd06008
      Location:1461 → 1505
      NF-X1-zinc-finger; Presumably a zinc binding domain, which has been shown to bind to DNA in the human nuclear transcriptional repressor NF-X1. The zinc finger can be characterized by the pattern C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1 zinc finger ...
      COG1199
      Location:596 → 773
      DinG; Rad3-related DNA helicase [Replication, recombination and repair]
      TIGR01448
      Location:518 → 647
      recD_rel; helicase, putative, RecD/TraA family
      pfam15042
      Location:1484 → 1562
      LELP1; Late cornified envelope-like proline-rich protein 1
      pfam13086
      Location:903 → 1038
      AAA_11; AAA domain
      cd18808
      Location:1075 → 1251
      SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
      cd17936
      Location:978 → 1073
      EEXXEc_NFX1; EEXXE-box helicase domain of NFX1
    Nucleotide Protein
    Heading Accession and Version

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