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    TRPM4 transient receptor potential cation channel subfamily M member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719120, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRPM4provided by VGNC
    Official Full Name
    transient receptor potential cation channel subfamily M member 4provided by VGNC
    Primary source
    VGNC:VGNC:79105
    See related
    Ensembl:ENSMMUG00000007538
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRPM4 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (49134782..49184374)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (44556568..44610560)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(II) chain-like Neighboring gene PTPRF interacting protein alpha 3 Neighboring gene histidine rich calcium binding protein Neighboring gene uncharacterized LOC114674206 Neighboring gene histone H3.3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ligand-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transient receptor potential cation channel subfamily M member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      49134782..49184374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015124546.2 → XP_014980032.2  transient receptor potential cation channel subfamily M member 4 isoform X11

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:602 → 898
      trp; transient-receptor-potential calcium channel protein

    2. XM_015124542.2 → XP_014980028.2  transient receptor potential cation channel subfamily M member 4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Related
      ENSMMUP00000054650.2, ENSMMUT00000078921.2
      Conserved Domains (1) summary
      TIGR00870
      Location:787 → 1083
      trp; transient-receptor-potential calcium channel protein

    3. XM_028840158.1 → XP_028695991.1  transient receptor potential cation channel subfamily M member 4 isoform X4

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:787 → 1083
      trp; transient-receptor-potential calcium channel protein

    4. XM_028840155.1 → XP_028695988.1  transient receptor potential cation channel subfamily M member 4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:793 → 1089
      trp; transient-receptor-potential calcium channel protein

    5. XM_028840156.1 → XP_028695989.1  transient receptor potential cation channel subfamily M member 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:792 → 1088
      trp; transient-receptor-potential calcium channel protein

    6. XM_028840157.1 → XP_028695990.1  transient receptor potential cation channel subfamily M member 4 isoform X3

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:788 → 1084
      trp; transient-receptor-potential calcium channel protein

    7. XM_028840161.1 → XP_028695994.1  transient receptor potential cation channel subfamily M member 4 isoform X8

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:722 → 1018
      trp; transient-receptor-potential calcium channel protein

    8. XM_028840159.1 → XP_028695992.1  transient receptor potential cation channel subfamily M member 4 isoform X5

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:793 → 1089
      trp; transient-receptor-potential calcium channel protein

    9. XM_028840160.1 → XP_028695993.1  transient receptor potential cation channel subfamily M member 4 isoform X7

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:793 → 1089
      trp; transient-receptor-potential calcium channel protein

    10. XM_015124544.2 → XP_014980030.2  transient receptor potential cation channel subfamily M member 4 isoform X9

      UniProtKB/TrEMBL
      A0A1D5R2W5
      Conserved Domains (1) summary
      TIGR00870
      Location:716 → 1012
      trp; transient-receptor-potential calcium channel protein

    11. XM_028840162.1 → XP_028695995.1  transient receptor potential cation channel subfamily M member 4 isoform X10

      Conserved Domains (1) summary
      TIGR00870
      Location:608 → 904
      trp; transient-receptor-potential calcium channel protein

    RNA

    1. XR_003725204.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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