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    FCN2 ficolin 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712486, updated on 9-Nov-2023

    Summary

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    Gene symbol
    FCN2
    Gene description
    ficolin 2
    See related
    Ensembl:ENSMMUG00000014403
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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    Genomic context

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    See FCN2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (3346644..3353491, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (3445237..3452246, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672620 Neighboring gene ficolin-1 Neighboring gene ficolin-2-like Neighboring gene collagen type V alpha 1 chain Neighboring gene uncharacterized LOC114672696

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ficolin-2
    Names
    ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194099.2 → NP_001181028.2  ficolin-2 precursor

      Status: INFERRED

      Source sequence(s)
      QNVO02000131
      UniProtKB/TrEMBL
      F7BQZ1
      Related
      ENSMMUP00000018921.2, ENSMMUT00000020212.3
      Conserved Domains (1) summary
      cd00087
      Location:102 → 312
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      3346644..3353491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834367.1 → XP_028690200.1  ficolin-2 isoform X3

      Conserved Domains (2) summary
      pfam01391
      Location:49 → 73
      Collagen; Collagen triple helix repeat (20 copies)
      cd00087
      Location:99 → 309
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    2. XM_028834366.1 → XP_028690199.1  ficolin-2 isoform X2

      Conserved Domains (2) summary
      pfam01391
      Location:49 → 73
      Collagen; Collagen triple helix repeat (20 copies)
      cd00087
      Location:107 → 317
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    3. XM_015116395.2 → XP_014971881.2  ficolin-2 isoform X1

      Conserved Domains (1) summary
      cd00087
      Location:110 → 320
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    Nucleotide Protein
    Heading Accession and Version

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