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    OTUD7B OTU deubiquitinase 7B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705774, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OTUD7Bprovided by VGNC
    Official Full Name
    OTU deubiquitinase 7Bprovided by VGNC
    Primary source
    VGNC:VGNC:75634
    Locus tag
    EGK_01217
    See related
    Ensembl:ENSMMUG00000007244
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZA20D1
    Orthologs
    human mouse all
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    Genomic context

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    See OTUD7B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (101158250..101232152)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (124292256..124365963, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC114670836 Neighboring gene uncharacterized LOC114670841 Neighboring gene myotubularin related protein 11 Neighboring gene splicing factor 3b subunit 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K11-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K63-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    OTU domain-containing protein 7B
    Names
    OTU domain containing 7B
    zinc finger protein Cezanne
    NP_001253752.1
    XP_015006017.1
    XP_015006036.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266823.1 → NP_001253752.1  OTU domain-containing protein 7B

      See identical proteins and their annotated locations for NP_001253752.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045692
      UniProtKB/TrEMBL
      A0A8J8Y7V2, F7BEE5, G7MDG5
      Related
      ENSMMUP00000039174.1, ENSMMUT00000046131.3
      Conserved Domains (4) summary
      cd14347
      Location:4 → 46
      UBA_Cezanne_like; UBA-like domain found in OTU domain-containing proteins OTU7A, OTU7B and similar proteins
      pfam01754
      Location:801 → 823
      zf-A20; A20-like zinc finger
      pfam07271
      Location:620 → 797
      Cytadhesin_P30; Cytadhesin P30/P32
      cl19932
      Location:189 → 359
      OTU; OTU-like cysteine protease

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      101158250..101232152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015150550.2 → XP_015006036.1  OTU domain-containing protein 7B isoform X2

      Conserved Domains (3) summary
      pfam01754
      Location:709 → 731
      zf-A20; A20-like zinc finger
      pfam07271
      Location:528 → 705
      Cytadhesin_P30; Cytadhesin P30/P32
      cl19932
      Location:97 → 267
      OTU; OTU-like cysteine protease

    2. XM_015150531.2 → XP_015006017.1  OTU domain-containing protein 7B isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y7V2, F7BEE5, G7MDG5
      Conserved Domains (4) summary
      cd14347
      Location:4 → 46
      UBA_Cezanne_like; UBA-like domain found in OTU domain-containing proteins OTU7A, OTU7B and similar proteins
      pfam01754
      Location:801 → 823
      zf-A20; A20-like zinc finger
      pfam07271
      Location:620 → 797
      Cytadhesin_P30; Cytadhesin P30/P32
      cl19932
      Location:189 → 359
      OTU; OTU-like cysteine protease
    Nucleotide Protein
    Heading Accession and Version

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