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    WDR43 WD repeat domain 43 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704047, updated on 17-Aug-2024

    Summary

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    Official Symbol
    WDR43provided by VGNC
    Official Full Name
    WD repeat domain 43provided by VGNC
    Primary source
    VGNC:VGNC:79753
    See related
    Ensembl:ENSMMUG00000022268
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See WDR43 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (79993402..80049383, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (29206846..29262824)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene photoreceptor cilium actin regulator Neighboring gene TOG array regulator of axonemal microtubules 2 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene tRNA methyltransferase 61B Neighboring gene speedy/RINGO cell cycle regulator family member A Neighboring gene uncharacterized LOC114671743

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      79993402..80049383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112006.2 → XP_014967492.1  WD repeat-containing protein 43

      UniProtKB/TrEMBL
      F6XGL8, G7N9R0
      Related
      ENSMMUP00000029313.3, ENSMMUT00000031327.4
      Conserved Domains (4) summary
      COG2319
      Location:19 → 217
      WD40; WD40 repeat [General function prediction only]
      pfam04003
      Location:474 → 570
      Utp12; Dip2/Utp12 Family
      sd00039
      Location:19 → 57
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:19 → 272
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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