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    FNDC5 fibronectin type III domain containing 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710159, updated on 5-Mar-2024

    Summary

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    Gene symbol
    FNDC5
    Gene description
    fibronectin type III domain containing 5
    See related
    Ensembl:ENSMMUG00000062568
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FNDC5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (191772385..191780997)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (31947932..31956441, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673136 Neighboring gene hippocalcin Neighboring gene S100P binding protein Neighboring gene tyrosyl-tRNA synthetase 1 Neighboring gene NHS like 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of brown fat cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibronectin type III domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      191772385..191780997
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134594.2 → XP_014990080.2  fibronectin type III domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A5F8ALL7
      Related
      ENSMMUP00000078288.1, ENSMMUT00000109205.1
      Conserved Domains (2) summary
      cd00063
      Location:79 → 169
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:196 → 229
      DUF4808; Domain of unknown function (DUF4808)

    2. XM_015134585.2 → XP_014990071.2  fibronectin type III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ALL7
      Conserved Domains (2) summary
      cd00063
      Location:34 → 124
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:151 → 184
      DUF4808; Domain of unknown function (DUF4808)
    Nucleotide Protein
    Heading Accession and Version

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