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    NHLH1 nescient helix-loop-helix 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719704, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NHLH1provided by VGNC
    Official Full Name
    nescient helix-loop-helix 1provided by VGNC
    Primary source
    VGNC:VGNC:75347
    Locus tag
    EGK_01505
    See related
    Ensembl:ENSMMUG00000021865
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NHLH1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (90566015..90571758, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (135098218..135103954)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene VANGL planar cell polarity protein 2 Neighboring gene U4 spliceosomal RNA Neighboring gene nicastrin Neighboring gene COPI coat complex subunit alpha Neighboring gene uncharacterized LOC114670148 Neighboring gene peroxisomal biogenesis factor 19

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    helix-loop-helix protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      90566015..90571758 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001117555.4 → XP_001117555.1  helix-loop-helix protein 1

      See identical proteins and their annotated locations for XP_001117555.1

      UniProtKB/TrEMBL
      A0A8J8Y2E9, F7EHS2, G7ME72
      Related
      ENSMMUP00000028792.2, ENSMMUT00000030764.4
      Conserved Domains (1) summary
      cd19701
      Location:61 → 132
      bHLH_TS_HEN1; basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 1 (HEN-1) and similar proteins

    2. XM_028827050.1 → XP_028682883.1  helix-loop-helix protein 1

      UniProtKB/TrEMBL
      A0A8J8Y2E9, F7EHS2, G7ME72
      Conserved Domains (1) summary
      cd19701
      Location:61 → 132
      bHLH_TS_HEN1; basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 1 (HEN-1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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